Streptomyces cinereoruber: CP977_18095
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Entry
CP977_18095 CDS
T07115
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
scin
Streptomyces cinereoruber
Brite
KEGG Orthology (KO) [BR:
scin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scin03021
]
CP977_18095
Transcription machinery [BR:
scin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CP977_18095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_23
HTH_3
Sigma70_ECF
HTH_24
MarR
DUF7343
Motif
Other DBs
NCBI-ProteinID:
QEV33848
LinkDB
All DBs
Position
complement(4057089..4058066)
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AA seq
325 aa
AA seq
DB search
MVAAFLRRSRHRDRPRPQGGGMSTELDSSKVLTLTPVPVVPVPTQTTAPTAPESAEPTPP
PMPVTTGALDTRTLSRSLFLRLRALDAEGAAADSPERTYVRDTLIELNLPLVRYAAARFR
SRNEPMEDIVQVGTIGLIKAIDRFDCERGVEFPTFAMPTVVGEIKRFFRDTSWSVRVPRR
LQELRLALTKAGDELAQKLDRSPTVAELAAVLGVSEEDVVDGLAVGNAYTASSLDSPSPE
DDGGEGSLADRLGYEDTALEGVEYRESLKPLLAKLPPRERQIIMLRFFANMTQSQIGEEV
GISQMHVSRLLTRTLAQLRDGLISD
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtggtggctgcgttcctcagacggtcgcggcaccgcgaccgtccgcgacctcaagggggt
ggcatgtccacagaactggacagctccaaggtgctcacgctcacgcccgttcccgtcgtt
cccgtgcccacgcagacgacggcgccgacggcgcccgagagcgcggagcccacgcccccg
ccgatgcccgtcacgaccggcgccctcgacacccgcaccctctcccgctccctcttcctg
cggctgcgcgccctggacgcggagggcgcggccgccgacagcccggagcggacctacgtc
cgcgacaccctcatcgagctcaacctccccctcgtccggtacgcggccgcccgcttccgc
tcccgcaacgagcccatggaggacatcgtccaggtcggcaccatcggcctgatcaaggcg
atcgaccgcttcgactgcgaacggggcgtggagttcccgacgttcgcgatgcccacggtc
gtcggcgagatcaagcgcttcttccgcgacacctcgtggtccgtgcgggtcccgcgccgg
ctccaggagctgcgcctcgccctcaccaaggccggcgacgagctcgcccagaagctcgac
cgctcccccaccgtcgccgaactggccgccgtgctcggggtgtcggaggaggacgtggtc
gacggcctcgccgtcggcaacgcgtacaccgcctcctcgctcgactccccctcgcccgag
gacgacggcggcgagggctccctcgcggaccgcctcggttacgaggacaccgcgctcgaa
ggcgtcgagtaccgcgagtcgctcaagccgctgctcgccaagctcccgccccgcgagcgg
cagatcatcatgctgcgcttcttcgccaacatgacccagtcgcagatcggcgaggaggtc
ggcatctcccagatgcacgtctcgcgcctgctcacccgcaccctggcccagctccgggac
ggcctcatctccgactga
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