Streptomyces cinereoruber: CP977_18100
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Entry
CP977_18100 CDS
T07115
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
scin
Streptomyces cinereoruber
Brite
KEGG Orthology (KO) [BR:
scin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scin03021
]
CP977_18100
Transcription machinery [BR:
scin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CP977_18100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
MarR_2
GerE
NirdL-like_HTH
MarR
HTH_3
DUF134
HTH_24
DUF7343
HTH_31
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QEV33849
LinkDB
All DBs
Position
complement(4058238..4059089)
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AA seq
283 aa
AA seq
DB search
MNVPASTAPQVPPQHEAGGPETPRTRPQSTRGADTRALTQVLFGQLKNLEPGTPEHDRVR
GALIEANLPLVRYAAARFRSRNEPMEDVVQVGTIGLINAIDRFDPDRGVQFPTFAMPTVV
GEIKRYFRDNVRTVHVPRRLHELWVQVNGATEDLTTAHGRSPTTAEIAERLRIGEDEVLA
CIEAGRSYHATSLEAAQEGDGLPGLLDRLGYEDPALAGVEHRDLVRHLLVQLPEREQRIL
MLRYYSNLTQSQISQELGVSQMHVSRLLARSFARLRSANRIEA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgtgccggccagtacagcacctcaagtcccgccccagcacgaggcaggcggcccg
gagaccccgcgcacgcgcccccagagcacccgcggcgccgacacccgcgccctcacccag
gtcctcttcggccagctcaagaacctggagccgggcacccccgagcacgaccgggtgcgc
ggcgccctcatcgaggccaacctgccgctcgtccggtacgcggccgcccgcttccgctcc
cgcaacgagcccatggaggacgtcgtccaggtcggcaccatcggcctgatcaacgccatc
gaccgcttcgacccggaccggggcgtgcagttcccgacgttcgccatgccgaccgtcgtc
ggcgagatcaaacgctacttccgggacaacgtgcggaccgtgcacgtgccccgccggctg
cacgagctgtgggtccaggtgaacggcgccaccgaggacctgacgaccgcccacgggcgc
tcccccaccaccgccgagatcgccgagcggctgcggatcggggaggacgaggtgctcgcc
tgcatcgaggccggacgctcgtaccacgccacctccctggaggctgcacaggagggcgac
gggctgccgggcctgctcgaccggctcggttacgaggaccccgcgctcgccggggtggaa
caccgggacctggtccggcaccttctcgtacaactgcccgaacgggaacagcggatcctg
atgctgcgctactacagcaacttgacccagtctcagatcagccaggaactcggcgtctcc
cagatgcacgtgtcaagactcctcgcgcggagcttcgcacgattgagatccgcaaacagg
atcgaagcgtaa
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