Streptomyces cinereoruber: CP977_19640
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Entry
CP977_19640 CDS
T07115
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
scin
Streptomyces cinereoruber
Brite
KEGG Orthology (KO) [BR:
scin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scin03016
]
CP977_19640 (thpR)
Enzymes [BR:
scin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
CP977_19640 (thpR)
Transfer RNA biogenesis [BR:
scin03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
CP977_19640 (thpR)
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QEV34101
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Position
4363614..4364198
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AA seq
194 aa
AA seq
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MRLFAAVLPPSERLDELGRVVDRLRGLPGAGGVRWASRDGWHLTLAFMGEVDEALLPEVR
ARLERAASRTPVFPLRLHGGGHFGRRTLWAGVAGDLDTLRLLAERSDAAARRAGIAMGEH
RRYRAHLTVGRGRGEGVAMGPFLDVLDGFEGGRWEVDELVLVRSELPVSGVKGEQPRYER
IGSWPLGGGGSGAG
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttttcgccgccgtgctgccgccttcggagcggttggacgagctcgggcgtgtg
gtcgaccggttgcgggggctgcccggggccgggggagtgcgctgggcctcgcgggacggg
tggcacctcacgctcgccttcatgggggaggtggacgaggccctgctgcccgaggtgcgg
gcgcggctggagcgggccgcgtcccgtacgccggtctttccgctgcggctccacgggggc
gggcacttcgggcggcggacgctgtgggccggggtcgccggggacctggacacgctgcgg
ctcctcgccgagcggtccgacgcggccgcgcgccgggccgggatcgcgatgggggagcac
cgccggtaccgcgcccacctgaccgtcggacgggggaggggggaaggggttgccatgggg
cccttcctggacgtgctcgacgggttcgagggcggccggtgggaggtggacgagctggtt
ctcgtacggtccgagctgccggtgagcggggtgaagggggagcagccccggtacgagagg
atcggatcgtggcccctgggagggggcggaagcggggcgggttaa
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