Streptomyces cinereoruber: CP977_23240
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Entry
CP977_23240 CDS
T07115
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
scin
Streptomyces cinereoruber
Brite
KEGG Orthology (KO) [BR:
scin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scin03021
]
CP977_23240
Transcription machinery [BR:
scin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CP977_23240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR_2
HTH_24
NirdL-like_HTH
HTH_10
HTH_AsnC-type
HTH_3
DUF7343
MarR
HTH_Crp_2
Sigma70_ECF
IF2_N
GerE
HTH_AraC
DUF4423
Motif
Other DBs
NCBI-ProteinID:
QEV34722
LinkDB
All DBs
Position
complement(5122201..5123277)
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AA seq
358 aa
AA seq
DB search
MRSGDATAGIPGQKARPHEVATERADQMSEHEQQHEGAGTPGVPEAPAEASGAGGVRGDG
VNGTGGVNGAGGVNGAGGVNGTGGSGDAEARDADGADGAPEVHPAPVPQDRSGARALFVE
LRELPEGSPEKAELRNRLVRMHLPLVEHLARRFRNRGEPLDDLTQVATIGLIKSVDRFDP
ERGVEFSTYATPTVVGEIKRHFRDKGWAVRVPRRLQELRLSLTTATAELSQQHGRSPTVH
ELAERLGISEEEVLEGLESANAYSTLSLDVPDTDDESPAVADTLGAEDEALEGVEYRESL
KPLLEDLPPREKRILLLRFFGNMTQSQIAQEVGISQMHVSRLLARTLAQLREKLLVEE
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
gtgaggagcggggacgcgacggccggcatccccgggcagaaggcgcggccgcatgaggtc
gctacggagcgggcggaccagatgagcgagcacgagcagcagcacgagggtgccgggacc
ccgggcgtcccggaggcccccgcggaggcttccggggccggcggggtccggggcgacggc
gtcaacgggaccggcggagtcaatggcgccggcggtgtcaatggtgccggcggtgtcaac
gggaccggcgggtccggggacgccgaggcccgggacgccgacggggccgacggggcgccg
gaggtccaccccgcccccgtcccgcaggaccggagcggcgcccgcgccctcttcgtcgag
ctgcgcgagctgccggagggctcccccgagaaggcggagctgcgcaaccggctggtgcgg
atgcacctgccgctggtggagcacctggcccgacgcttccgcaaccgcggcgaaccgctg
gacgacctgacgcaggtggcgacgatcggcttgatcaagtcggtggaccggttcgacccg
gagcgcggggtcgagttctcgacgtacgccacccccacggtcgtcggcgagatcaagcgc
cacttccgggacaagggctgggcggtacgggtgccccgtcggctccaggagctgcggctc
tcgctgaccaccgcgaccgccgagctctcccagcagcacggacgctccccgacggtgcac
gagctggccgagcggctcgggatctcggaggaggaggtcctggagggcctggagtcggcg
aacgcctactcgacgctctccctggacgtcccggacaccgacgacgagtcgccggcggtg
gcggacacgctgggtgcggaggacgaggccctggagggggtcgagtaccgcgagtcgctc
aagccgctcctggaggacctgccgccccgggagaagcggatcctgctgctgcgcttcttc
gggaacatgacccagtcgcagatcgcgcaggaggtgggcatctcgcagatgcacgtctcc
cggctgctcgcccggacgctcgcgcagctgcgggagaagctcctggtggaggagtag
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