Streptomyces cinereoruber: CP977_24560
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Entry
CP977_24560 CDS
T07115
Name
(GenBank) HAMP domain-containing protein
Organism
scin
Streptomyces cinereoruber
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIT
HATPase_c
HAMP
Cytidylate_kin
FxsA
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QEV34942
LinkDB
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Position
complement(5427064..5430849)
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AA seq
1261 aa
AA seq
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MQGRFKRDGSGSPQARQGRADAPAEQEPRAGTDRGPSAPRTPNQGQGPSGEGGDGGRRAG
AGASPSEPSAAPAPKAKAENEVGPRIALRNWRISTRLVALLTLPVVAATALGGVRINESL
QDMEQLDHMQLLTKLTREATDLAKALQAERGHSAGPLANGRPVSDYQVANPRRKTDLDLK
AFLAATEEISSVEGDEALRSIRQNVSQIASQVTELHSIRGSAYKKDVSNSVTVEAYSRLI
RSLLSLSQDMAQATSNPEMIKRTRALAAFSSAKEYASIQQAIIAAALPPSDRARGTIAQG
DRLYGEAALNSEDDELKSFQAIYKSSGGDADDLTSALNRGNPSITTADKYAERVLTTENA
MQTIGRGHLNFTDEYDTKINAMDRIESILLGDMESMARELRQEAQRDAIINGALILLVLG
VSLVGAFVVARSMIRSLRRLQDTATKVAQERLPELVKQLSESDPQDVDTSVESVGVHSRD
EIGQVAAAFDDVHREAVRLAAEQALLRGNVNAMFTNLSRRSQGLIQRQLSLISELESREA
DPDQLSSLFKLDHLATRMRRNGENLLVLAGEEPGRRWTRPVPLVDVLRAAASEVEQYERI
ELAAVPATEVAGRVVNDLVHLLAELLENATSFSSPQTKVRVTGHALPDGRVLVEIHDTGI
GLSPEDLAAINERLASPPTVDVSVSRRMGLFVVGRLSLRHGIRIQLRPSDSGGTTALVML
PVDVAQGGKKPMPKPGAGGQGAMPPGASAPGGRLPAGPGAAGGPGGRPGQGGAPSSAAGR
LGAGAGAARGQVGAGSGPRAALPARDGAPLAGGPQGAPQSRTPQPQNAQPAQTGQAPQIP
QAPQAPEAPRPGGGGLIGGAASAIPSRTDVWGNQGGPQAGPGAQQQAPQGGGYDFPRPEL
PGGPQQSQQQRPQAASWGNEQAQQQPVRRPQQEMSPLDAPRGHEDPETTGRFAAPQGPGS
TGQFPRPDFGAPQQPQAPQQPQAPQGYQGGAQDPASTAQFPRPDFGAPQGPGSTGQFPRP
DFGAPQAPQQPQAPQGYQGGQQQQFGRQPFAPQPQSQVPQPPAPRRPVDGNDFGAPRPAE
PGRQQQPQQPQLQQPRRPEALPPASGAGDGRTPLYDNLETNWFHQDQGQAQQAQAQDPAQ
TAQTPVVPRSAAPAPRQGDQNGGAAWRTSPNDELVRQAERVRKPAAGGVTTSGLPRRVPK
ANLVPGTAQEQAHTAGPQVSRAPDDVRGRLTNLRRGIQQGRQAGNSTTGNHHLGPNHQQE
R
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
gtgcagggacgtttcaagagggatggctcggggtctccccaggcccgccagggccgagcg
gatgctccggcggagcaggaaccgcgtgccgggaccgaccgcggtccctcggccccgcgc
accccgaaccagggtcagggaccgtccggcgagggcggtgacggcggccgtcgcgcgggc
gccggggcctccccgtccgagccttccgccgcccccgcccccaaggccaaggccgagaac
gaggtcggcccccgaatagctcttcgcaactggcgcatctccacgcgcctggtcgcgctc
ctcaccctgcccgtggtcgcggcgaccgccctgggcggcgtccgcatcaacgagtcgctc
caggacatggagcagctcgaccacatgcagctgctcaccaagctgacccgtgaggcgacg
gacctcgccaaggccctccaggccgagcgcggccactccgccggcccgctggccaacggc
cgcccggtcagcgactaccaggtcgccaacccgcgccggaagacggacctggacctcaag
gccttcctcgccgccaccgaggagatctcctcggtcgagggcgacgaggcgctgcgcagc
atccgccagaacgtcagccagatcgcctcgcaggtcaccgagctccactcgatccggggc
agcgcgtacaagaaggacgtctccaactcggtgacggtcgaggcgtacagccgtctcatc
cgctcgctcctgagcctgtcccaggacatggcgcaggcgaccagcaaccccgagatgatc
aagcggacgcgcgcgctcgccgcgttctcgtccgccaaggagtacgcctccatccagcag
gcgatcatcgcggcggcgctgcccccgagcgaccgggcccgcggcacgatcgcccagggc
gaccggctgtacggcgaggccgcgctcaacagtgaggacgacgagctcaagtccttccag
gcgatctacaagtcgtccggcggcgacgccgacgacctgacctcggccctgaaccggggc
aacccgtcgatcaccaccgccgacaagtacgccgagcgcgtgctgacgacggagaacgcg
atgcagaccatcgggcgtggtcacctcaacttcaccgacgagtacgacaccaagatcaac
gccatggaccgcatcgagagcatcctgctcggcgacatggagtccatggcccgcgagctg
cgccaggaggctcagcgcgacgccatcatcaacggtgcgctgatcctgctcgtcctcggc
gtctcgctcgtcggcgccttcgtcgtggcgcggtccatgatccgctcgctgcgccgcctc
caggacaccgcgaccaaggtcgcccaggagcgcctgcccgagctggtcaagcagctctcc
gagtccgacccgcaggacgtcgacacctccgtcgagtccgtcggcgtgcactcccgggac
gagatcggccaggtggccgcggccttcgacgacgtgcaccgcgaggccgtccgcctcgcc
gccgagcaggccctcctccggggcaacgtcaacgcgatgttcaccaacctctcgcgccgt
tcccagggcctcatccagcgccagctctcgctcatctccgagctggagtcccgcgaggcc
gacccggaccagctctcctcgctcttcaagctcgaccacctcgcgacccgtatgcgccgg
aacggcgagaacctcctcgtcctcgccggcgaggagccgggccgccgctggacccgcccg
gtcccgctggtcgacgtgctccgcgccgccgcctccgaggtggagcagtacgagcggatc
gaactggccgcggtcccggcgaccgaggtcgccggccgggtcgtcaacgacctcgtgcac
ctcctcgccgagctgctggagaacgccacctcgttctcctccccgcagaccaaggtccgg
gtcaccggtcacgcgctgcccgacggccgggtcctggtcgagatccacgacaccggcatc
ggcctctcccccgaggacctcgcggcgatcaacgagcggctcgcctcgccgcccaccgtg
gacgtctcggtctcccgccgcatgggtctgttcgtggtcggccgcctgtccctgcgacac
ggcatccgcatccagctgcgcccctccgactcgggcggcaccaccgcgctcgtcatgctc
ccggtcgacgtcgcccagggcggcaagaagcccatgcccaagccgggcgcgggcggccag
ggcgcgatgcctccgggcgcctccgcccccggcggccggctccccgccggtcccggcgcg
gccggcggccccggcggacgtccgggccagggcggcgcgccgtcctcggcggccgggcgc
ctcggcgccggtgccggtgccgcgcgcggccaggtcggcgcgggaagcggcccccgggcc
gcgctgcccgcccgtgacggtgccccgctcgccggcggcccgcagggcgcgccgcagtcc
cgcaccccgcagccgcagaacgcccagccggcgcagaccggccaggctccgcagatcccg
caggcgccccaggcccccgaggccccgcgcccgggcggtggcggtctcatcggcggcgcc
gcgagcgccatcccctcccgtacggacgtgtggggcaaccagggcggcccgcaggccggt
cccggtgcgcagcagcaggcgccgcagggcggcgggtacgacttcccgcgccccgaactg
cccggcggtccgcagcagtcgcagcagcagcgtccgcaggccgcgagctggggcaacgag
caggcgcagcagcagccggtgcggcgtccccagcaggagatgtccccgctggacgccccg
cgcggccacgaggacccggagacgacgggccggttcgcggccccgcagggtcccggctcc
acgggccagttcccgcgccccgacttcggcgccccgcagcagccccaggcgccccagcag
ccgcaggccccgcaggggtaccagggcggtgcgcaggacccggcgtccacggcgcagttc
ccgcgcccggacttcggcgccccgcagggtcccggctccaccggtcagttcccgcgcccc
gacttcggcgccccgcaggccccgcagcagccccaggccccgcagggctaccagggcggc
cagcagcagcagttcggccggcagcccttcgcaccgcagccgcagtcccaggtcccgcag
cccccggccccgcgccggccggtcgacgggaacgacttcggcgccccgcgtccggccgag
ccgggccgtcagcagcagccgcagcagccccagctccagcagccgcgccgtccggaggcg
ctgccgccggcgagcggcgcgggcgacggccgcacgccgctgtacgacaacctggagacc
aactggttccaccaggaccagggccaggcccagcaggcccaggcccaggacccggcgcag
acggcgcagaccccggtcgtaccgcgctcggccgccccggccccccgccagggcgaccag
aacggcggggccgcctggcggacctcgcccaacgacgagctggtgcgccaggccgagcgg
gtgcgcaagcccgcggccggcggcgtcaccacctccggcctcccccggcgcgtgccgaag
gccaacctcgtacccgggaccgcccaggagcaggcccacacggccggcccccaggtctcg
cgtgcacccgacgacgtccgcggccggctcaccaacctgcgccgcggcattcagcagggc
cgtcaggccggtaactcgaccacgggtaatcaccacctcggtccgaaccatcagcaggag
cgttag
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