Streptomyces cinereoruber: CP977_25420
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Entry
CP977_25420 CDS
T07115
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
scin
Streptomyces cinereoruber
Pathway
scin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CP977_25420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scin03019
]
CP977_25420
03016 Transfer RNA biogenesis [BR:
scin03016
]
CP977_25420
Enzymes [BR:
scin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CP977_25420
Messenger RNA biogenesis [BR:
scin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CP977_25420
Transfer RNA biogenesis [BR:
scin03016
]
Prokaryotic type
tRNA degradation factors
CP977_25420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
QEV35098
LinkDB
All DBs
Position
5607795..5610011
Genome browser
AA seq
738 aa
AA seq
DB search
MENETHYAEAVIDNGAFGTRTIRFETGRLAKQAAGSAVAYLDDDTMVLSATTASKRPKDQ
LDFFPLTVDVEERMYAAGKIPGSFFRREGRPSEDAVLTCRLIDRPLRPSFKKGLRNEIQI
VETIMALNPDHLYDVVAINAASCSTQLAGLPFSGPIGGTRVALIKGQWVAFPTHTELEDA
VFDMVVAGRVLEDGDVAIMMVEAEATEKTIQLVKGGAEAPTEEVVAAGLEAAKPFIKVLC
KAQSDLAAKAAKPTGEFPVFLDYQDDVLEALSAAVKGELAQALTIAGKQEREAELDRIKE
LAAEKLLPAFEGREKEISGAYRALTKKLVRERIIKDKVRIDGRGITDIRTLAAEVEAIPR
VHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSVGETGRVGSP
KRREIGHGALAERALVPVLPTREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVP
LKAPVAGIAMGLISEEIDGQTHYVALTDILGAEDAFGDMDFKVAGTKDFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMMEAIDTPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGAEITIEDDGTIYIGAADGPAAEAARATINGIANPTMPEVGERYLGTVVK
TTTFGAFVSLLPGKDGLLHISQIRKLAGGKRVENVEDVLAIGSKVQVEIAEIDQRGKLSL
IPVIADEDAEGEKDDAAK
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaggccgtcatcgacaacggagccttcggcacccgc
accatccgcttcgagaccggccgcctcgccaagcaggccgccggctccgccgtcgcctac
ctggacgacgacacgatggtcctctcggcgaccaccgcctcgaagcgccccaaggaccag
ctcgacttcttccccctgacggtggacgtcgaggagcggatgtacgcggccggcaagatc
cccggctccttcttccgccgggagggccgcccctccgaggacgccgtcctcacctgtcgc
ctgatcgaccgcccgctgcgcccctccttcaagaagggcctgcgcaacgagatccagatc
gtcgagacgatcatggcgctcaaccccgaccacctgtacgacgtggtcgccatcaacgcc
gcctcctgctccacgcagctggccggcctgcccttctccggcccgatcggcggcacccgc
gtcgccctgatcaagggccagtgggtcgcgttcccgacgcacaccgagctcgaggacgcc
gtcttcgacatggtcgtcgccggccgcgtcctggaggacggcgacgtcgcgatcatgatg
gtcgaggccgaggccaccgagaagaccatccagctggtcaagggcggcgccgaggcgccg
accgaggaggtcgtcgccgccggtctcgaggccgcgaagcccttcatcaaggtcctctgc
aaggcccagtcggacctcgccgccaaggccgccaagcccaccggcgagttcccggtcttc
ctcgactaccaggacgacgtcctggaggcgctctccgccgccgtcaagggcgagctcgcc
caggcgctcaccatcgccggcaagcaggagcgcgaggccgagctcgaccgcatcaaggag
ctcgccgccgagaagctcctcccggccttcgagggccgcgagaaggagatctcgggcgcc
taccgcgcgctgaccaagaagctggtccgcgagcgcatcatcaaggacaaggtccgcatc
gacggccgcggcatcacggacatccgtacgctcgccgccgaggtcgaggccatcccgcgc
gtgcacggctccgccctgttcgagcgcggcgagacccagatcctgggcgtcaccaccctc
aacatgctccgcatggagcagcagctggacaccctctccccggtgacccgcaagcgctac
atgcacaactacaacttcccgccgtactccgtcggcgagaccggccgcgtgggctcgccc
aagcgccgcgagatcggccacggcgccctcgccgagcgcgccctcgtgccggtcctcccg
acccgcgaggagttcccctacgcgatccgccaggtgtccgaggccctcggctccaacggt
tcgacgtccatgggctcggtctgcgcctccaccatgtcgctgctgaacgccggtgtgccc
ctcaaggcccccgtcgccggcatcgccatgggcctgatctccgaggagatcgacggccag
acgcactacgtcgccctcaccgacatcctcggtgcggaggacgccttcggcgacatggac
ttcaaggtcgccggtacgaaggacttcgtcaccgccctccagctcgacaccaagctggac
ggcatcccggcctccgtcctggccgcggccctcaagcaggcccgcgacgcccgcctccac
atcctcgacgtgatgatggaagcgatcgacaccccggacgagatgtcccccaacgccccg
cggatcatcaccgtcaagatccccgtggacaagatcggcgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacaccggcgccgagatcacgatcgaggacgacggc
accatctacatcggtgccgccgacggcccggccgccgaggccgcccgcgccacgatcaac
ggcatcgccaacccgaccatgccggaggtcggcgagcgctacctgggcacggtcgtcaag
accaccaccttcggcgccttcgtctccctgctcccgggcaaggacggcctgctgcacatc
tcgcagatccgcaagctcgccggcggcaagcgcgtggagaacgtcgaggacgtgctcgcg
atcggctccaaggtccaggtcgagatcgccgagatcgaccagcgcggcaagctctccctg
atccccgtgatcgcggacgaggacgccgagggcgagaaggacgacgccgccaagtga
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