Streptomyces cinereoruber: CP977_25515
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Entry
CP977_25515 CDS
T07115
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
scin
Streptomyces cinereoruber
Brite
KEGG Orthology (KO) [BR:
scin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scin03009
]
CP977_25515 (rimO)
Enzymes [BR:
scin01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CP977_25515 (rimO)
Ribosome biogenesis [BR:
scin03009
]
Prokaryotic type
ribosomal protein modification factors
CP977_25515 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
QEV35111
LinkDB
All DBs
Position
5636665..5638158
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AA seq
497 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLAADGWELVENAEQADVAVVNTCGFVEAAKKDS
VDALLEANDLKDHGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYADISNRLQTIL
SGGSVEAHTPRDRRKLLPLSPVERQEAAAAVALPGHGDGAEAPTDAPADLPEGLAPASGP
RAPLRRRLDASPVASVKLASGCDRRCTFCAIPSFRGSFVSRRPSDVLNETRWLAEQGVKE
IMLVSENNTSYGKDLGDIRLLEGLLPELAAVDGIERVRVSYLQPAEMRPGLIDVLTSTEK
VVPYFDLSFQHSAPDVLRAMRRFGDTDRFLELLETIRSKAPTAGARSNFIVGFPGETEAD
FAELERFITHARLDAIGVFGYSDEDGTEAATYEHKLDQEVVDKRLAHLSRLAEELTAQRA
EERIGETLEVLVESLDEEDGWIGRAAHQAPETDGQVVLVTADGTDPDLAPGRMVRAKVVG
TEGVDLVAECLFEEAGR
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgtaccgtcgcccttgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcttggcagcggacggctgggagctcgtcgagaacgccgag
caagccgatgtcgccgtcgtcaacacctgcggattcgtcgaggccgccaagaaggactcc
gtcgacgccctgctcgaagccaacgatctgaaggaccacggccggacccaggccgtcgtc
gccgtcggctgcatggccgagcggtacggcaaggagctcgccgaagccctcccggaggcc
gacggcgtcctcggcttcgacgactacgccgacatctccaaccgcctccagaccatcctc
agcggcggcagcgtcgaggcccacaccccccgcgaccggcgcaagctgctgccgctctcg
cccgtggagcgccaggaggccgcggccgccgtggccctgccggggcacggcgacggcgcc
gaggcgcccaccgacgccccggccgacctgcccgagggcctcgcgcccgcctccggcccg
cgcgcgccgctccgccggcgcctggacgccagccccgtcgcctccgtgaagctggcctcc
ggctgcgaccgccgctgcaccttctgcgccatcccctccttccgcggctccttcgtctcg
cgccgcccctcggacgtgctgaacgagacgcgctggctcgccgagcagggcgtgaaggag
atcatgctggtctccgagaacaacacctcctacggcaaggacctcggcgacatccgcctc
ctggagggcctgctgcccgagctggcggccgtggacggcatcgagcgcgtccgcgtcagc
tacctccagcccgccgagatgcgccccggcctgatcgacgtcctcacctccaccgagaag
gtcgtcccgtacttcgacctctccttccagcacagcgcccccgacgtgctgcgggccatg
cgccgcttcggcgacaccgaccgcttcctggagctcctggagaccatccgctccaaggcc
cccacggccggcgcccgctccaacttcatcgtcggcttccccggcgagaccgaggcggac
ttcgccgagctggaacgcttcatcacccacgcgcgcctcgacgccatcggcgttttcggc
tactccgacgaggacggcaccgaggccgccacgtacgagcacaagctcgaccaggaagtg
gtcgacaagcggctcgcccacctctcccggctcgccgaggagctcaccgcccagcgcgcg
gaggagcggatcggagagaccctggaggtactggtcgagtccctggacgaggaggacggc
tggatcggccgcgccgcccaccaggcccccgagaccgacgggcaggtggtcctcgtcacc
gccgacggcacggaccccgacctggccccgggccgtatggtcagggcgaaggtcgtcggg
acggagggcgtcgacctggtggccgagtgtcttttcgaggaggcgggcagatga
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