Streptomyces cinereoruber: CP977_25865
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Entry
CP977_25865 CDS
T07115
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
scin
Streptomyces cinereoruber
Pathway
scin02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
scin00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CP977_25865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scin03021
]
CP977_25865
Transcription machinery [BR:
scin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CP977_25865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
Sigma70_r1_1
Motif
Other DBs
NCBI-ProteinID:
QEV35169
UniProt:
A0AAV4KT80
LinkDB
All DBs
Position
5720942..5722486
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AA seq
514 aa
AA seq
DB search
MSASTSRTLPPEIAESESVMALIERGKADGQIAGDDVRRAFEADQIPPTQWKNVLRSLNQ
ILEEEGVTLMVSAAESPKRARKSVAAKSPAKRTATKTVTARATVTKSAVPAAAPAAEGAD
PADEAGSTAKKAAAKKTATKKTAAKKTVAKKTAAKKTTSKKDAEELIEGEELLEDVAPGK
GEDEETEGETKGFVLSDEDEDDAPAQQVAVAGATADPVKDYLKQIGKVPLLNAEQEVELA
KRIEAGLFAEDKLANSDKLAPKLKRELEIIAEDGRRAKNHLLEANLRLVVSLAKRYTGRG
MLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVE
VINKLARVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLHTPLGEDGDSE
FGDLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGK
VYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggccagcacatcccgtacgctcccgccggagatcgccgagtccgagtctgtgatg
gcgctcatcgagcggggaaaggctgatgggcagatcgccggcgatgacgtgcgtcgggcc
ttcgaggctgaccagattccgccaacccagtggaagaatgttctgcgcagcctcaatcag
atcctcgaggaagagggtgtgacgctgatggtcagtgcagcggagtcgccgaagcgcgcc
cgcaagagcgtcgcagcgaagagcccggccaagcgcaccgccaccaagaccgtcaccgcc
agggcgaccgtgacgaagtccgccgtcccggccgcggcccccgccgccgaaggcgccgac
ccggccgacgaggccggttcgaccgccaagaaggcggccgcgaagaagaccgccaccaag
aagacggcggccaagaagaccgtcgccaagaagacggcggccaagaagaccacgtccaag
aaggacgccgaagagctcatcgagggcgaggagctcctcgaggacgtcgctcccggcaag
ggcgaggacgaggagaccgagggcgagaccaagggcttcgtgctgtccgacgaggacgag
gacgacgctccggcgcagcaggtcgcggtcgccggcgccaccgccgacccggtcaaggac
tacctcaagcagatcggcaaggtcccgctgctcaacgccgagcaggaggtcgaactcgcc
aagcgcatcgaggccggtctgttcgccgaggacaagctcgccaactcggacaagctcgcg
ccgaagctcaagcgcgagctggagatcatcgccgaggacggccgccgggccaagaaccac
ctcctggaggccaacctccgtctggtggtctccctggccaagcgctacaccggccgcggc
atgctcttcctggacctgatccaggagggcaacctgggtctgatccgtgccgtcgagaag
ttcgactacaccaagggctacaagttctccacgtacgccacctggtggatccgtcaggcg
atcacccgcgccatggccgaccaggcccgcaccatccgtatcccggtgcacatggtcgag
gtcatcaacaagctcgcacgcgtgcagcgccagatgctccaggacctgggccgcgagccc
accccggaggagctggccaaggagctcgacatgaccccggagaaggtcatcgaggtccag
aagtacggccgtgagccgatctccctccacaccccgctgggtgaggacggcgacagcgag
ttcggcgacctcatcgaggactccgaggcggtcgtcccggccgacgcggtgagcttcacg
ctcctccaggagcagctgcactccgtcctcgacaccctctccgagcgcgaggcgggcgtc
gtctcgatgcgcttcggcctcaccgacggccagccgaagacgctggacgagatcggcaag
gtctacggcgtgacgcgcgagcggatccgccagatcgagtcgaagacgatgtcgaagctc
cgtcacccgtcgcgctcgcaggtgctccgcgactacctcgactga
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