Streptomyces cinereoruber: CP977_29135
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Entry
CP977_29135 CDS
T07115
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
scin
Streptomyces cinereoruber
Pathway
scin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CP977_29135 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scin03019
]
CP977_29135 (recQ)
03400 DNA repair and recombination proteins [BR:
scin03400
]
CP977_29135 (recQ)
Enzymes [BR:
scin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CP977_29135 (recQ)
Messenger RNA biogenesis [BR:
scin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CP977_29135 (recQ)
DNA repair and recombination proteins [BR:
scin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CP977_29135 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
DUF6401
ResIII
Motif
Other DBs
NCBI-ProteinID:
QEV35740
UniProt:
A0A5J6IYG5
LinkDB
All DBs
Position
6448074..6450125
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AA seq
683 aa
AA seq
DB search
MVLSDASPEISEPARVLHRVFGYSSFRGEQQEIIEQVVGGGDALVLMPTGGGKSLCYQIP
ALVRDGTGIVISPLIALMQDQVDALRALGVRAGFLNSTQDPYERQAVEQAFLADELDLLY
LAPERLRTEGTQRLLDRGRVSLFAIDEAHCVAQWGHDFRPDYLALSMLHERWPKVPRIAL
TATATEATHAEIAKRLGLEDARHFVAGFDRPNIQYRIVPKNNPFKQLLELIKTEHAGDAG
VVYCLSRSSVEKTAALLVEQGIDAVPYHAGMDARTRAANQARFLREDGVVVVATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGEPATAWLAYGLQDVVQQRKLIDSSEGDE
QHRRGLARHLDAMLALCETVDCRRVRLLEYFGQKGEPCGNCDTCLTPAESWDGTVPAQKL
LSTVWRLAKERRQKFGAGQIIDILQGKRTAKVIQFDHDALSVFGVGSDLGTAEWRGIVRQ
LLAQGLIAVEGDYGTLVLTEQSGEVLGGRRTVQMRKEKAVAPARKEPGSRSGKGARVPVD
LPAEAVPVFEALRAWRAATAREQGVPAYVVFHDATLREIATLRPGTVEELGTVGGVGEAK
LTKYAEGVLETLAEAGAAAPAGQDPAPAGSAPAPAVPAASGPAPAAPVRGAGASGSVPAP
AAPYDDEPPFDFDELEPPWDEEE
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggtcctctccgacgcttccccagagatctccgagcccgcccgggtgctccaccgtgtc
ttcggctacagctccttccgcggggagcagcaggagatcatcgagcaggtcgtcggcggt
ggcgacgcgctcgtgctgatgccgaccggcggcggcaagtcgctctgctaccagatcccg
gccctggtcagagacggcacgggcatcgtgatctcgcccctcatcgcgctcatgcaggac
caggtggacgcgctgcgggccctcggggtgcgggcgggcttcctgaactccacgcaggac
ccgtacgagcggcaggccgtcgagcaggcgttcctcgcggacgagctggacctgctctac
ctggcccccgagcggctgcggaccgagggcacgcagcggctcctggaccggggccgggtg
tcgctcttcgcgatcgacgaggcgcactgcgtcgcccagtggggccacgacttccggccc
gactacctggccctgtccatgctgcacgagcggtggccgaaggtgccgcggatcgccctg
acggcgaccgccaccgaggccacccacgccgagatcgcgaagcggctgggcctggaggac
gcccggcacttcgtcgccggcttcgaccggccgaacatccagtaccgcatcgtccccaag
aacaacccgttcaagcagctcctggagctgatcaagaccgagcacgcgggggacgccggg
gtcgtctactgcctctcgcgctcctccgtcgagaagaccgccgcgctcctggtggagcag
ggcatcgacgccgtgccgtaccacgccggcatggacgcccgcacgcgcgccgcgaaccag
gcccgcttcctgcgcgaggacggggtcgtcgtggtggcgacgatcgccttcggcatgggc
atcgacaagccggacgtgcggttcgtggcccacctcgacctgccgaagtccgtcgagggc
tactaccaggagaccggccgcgcgggccgcgacggcgagccggccacggcgtggctggcc
tacggcctccaggacgtggtccagcagcgcaagctcatcgactcctccgagggcgacgag
cagcaccgccggggcctcgccaggcacctggacgccatgctggcgctctgcgagaccgtc
gactgccgccgggtgcgcctcctggagtacttcgggcagaagggcgagccgtgcggcaac
tgcgacacctgcctgaccccggccgagtcctgggacggcacggtccccgcgcagaagctg
ctctccacggtgtggcggctcgccaaggagcggcgccagaagttcggcgccggccagatc
atcgacatcctccagggcaagcggacggccaaggtcatccagttcgaccacgacgccctc
tcggtgttcggcgtcggctccgacctgggcaccgccgagtggcgcgggatcgtccgccag
ctcctcgcccaggggctgatcgccgtcgagggggactacgggacgctcgtcctcaccgag
cagagcggtgaggtcctgggcggccgccgcaccgtccagatgcgcaaggagaaggcggtc
gccccggcccgcaaggagccggggagccgttccggcaagggcgcccgcgtcccggtcgac
ctgccggccgaggccgtgccggtcttcgaggcgctccgcgcctggcgggccgcgaccgcc
cgcgagcagggcgtcccggcgtacgtggtcttccacgacgcgaccctgcgggagatcgcg
accctgcgccccggcacggtcgaggagctgggcaccgtcggcggcgtcggcgaggccaag
ctgaccaagtacgccgagggcgtcctggagacgctggcggaggccggcgccgccgccccg
gccgggcaggacccggcgccggccggaagcgcaccggccccggccgttcccgccgcctcc
ggcccggccccggcggcgcccgtccggggagccggggcgtccgggtccgtgcccgcgccc
gccgccccgtacgacgacgaaccgcccttcgacttcgacgagctcgaaccgccttgggac
gaggaggagtag
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