Streptomyces cinnabarinus: STRCI_000358
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Entry
STRCI_000358 CDS
T08957
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
scir
Streptomyces cinnabarinus
Brite
KEGG Orthology (KO) [BR:
scir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scir03021
]
STRCI_000358
Transcription machinery [BR:
scir03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
STRCI_000358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
DUF7343
HTH_3
HTH_31
GerE
HTH_24
Sigma70_ECF
MarR_2
HTH_Crp_2
HTH_37
Phage_antitermQ
MarR
HTH_28
Motif
Other DBs
NCBI-ProteinID:
WAZ19318
LinkDB
All DBs
Position
384861..385658
Genome browser
AA seq
265 aa
AA seq
DB search
MPTTGRTKQHQHPHNDAPDTAADFQLLARLPEGPKRKALRDRLVQAWLPMAERIAVRFKG
RGEALEDLYQVAALGLVKAVDHYDPDRGCAFEAYAVPTVTGEIKRHFRDHMWTLHVPRRI
QDLRNRVRQATKELSQTTPGRSPTVREIADLTDLSEAEVRSGMEALDCFSALSLEAEMPG
TDGYALGDSLGAPDPAFDVVVDRVAVRPCLERLPERERTILYLRFFHGMTQSRIAEQLGI
SQMHVSRLLSGCFAHLREELLVQAP
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccaccggcagaacgaagcagcaccagcacccgcacaacgacgcccctgacacc
gcggccgacttccagctactggcgcggctgcccgaaggcccgaaacgcaaggcactgcgt
gatcgcctggtccaggcctggctgcccatggcggaacgcatcgcggtccggttcaagggc
cgcggcgaggccctcgaagacctttaccaggtggccgcgctcggcctggtcaaggccgtc
gaccactacgacccggaccgcggctgcgccttcgaggcgtacgcggtacccaccgtcacc
ggcgagatcaagcggcacttccgcgaccacatgtggacactgcatgtgccgcgccggatc
caggatctgcgcaaccgggtccgccaggcgacgaaggagctgtcgcagacgaccccgggc
cgatccccgaccgtccgggagatcgccgacctgaccgatctgagcgaggccgaggtccgc
tccgggatggaggccctggactgcttctccgcgctgtccctggaggcggagatgcccggc
accgacgggtacgccctcggtgactcgctcggcgcaccggacccggccttcgacgtcgtc
gtcgaccgggtggccgtccggccctgtctggagcggctgcccgagcgcgaacgcaccatc
ctctatctgcggttcttccacggcatgacccagagccgcatagccgagcagctcgggatc
tcccagatgcacgtctcccggctgctcagcggctgcttcgcgcacctgcgggaggagctg
ctcgtccaggcaccgtga
DBGET
integrated database retrieval system
