Streptomyces cinnabarinus: STRCI_000986
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Entry
STRCI_000986 CDS
T08957
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
scir
Streptomyces cinnabarinus
Pathway
scir00040
Pentose and glucuronate interconversions
scir01100
Metabolic pathways
scir02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
STRCI_000986
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
STRCI_000986
Enzymes [BR:
scir01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
STRCI_000986
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
WAZ19901
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Position
complement(1069491..1071050)
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AA seq
519 aa
AA seq
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MRRPLALRLSAASATLALAAAAGVAALSMPAASAATGGVTGYATQNGGTTGGAGGQTVKA
TTGTQIHAALCGRASSSTPIVIQVEGTINHGNTAKVSGDSCNTAAGVIELKQISNVTIVG
VGGGAVFDQLGIHIRESSNIIIQNVTVRNVKKSGSPTSNGGDAIGMEGDVRNVWVDHATL
EASGGESEGYDGLFDMKDNTQYVTLSYSILRNSGRGGLIGSSESDLSNGYVTFHHNLYSN
IDSRAPLLRGGTAHAYNNHYVSLNESGINSRAGAKAKVDNNYFEDSKDVLGTFYTDQRGS
WQVSGNVFDNVTWSSPGSDNYPAGPNPTSNTTVSIPYAFTLDAATCVPDVVSRTAGAGTG
LKVSDGNCTPQTPNPTPTTPTPTPTPTPTPTPTPTQPTGTNLSIGAGADGSSKADGTSYG
NVRDGDMGTYWSPSGSTGSVSVKWGSATTVAKVNIREAAGSTGAIGSWRLLNADTGAVLT
SGTGAGVITVPQTSLKKITFEITGSSATPKVAEFETYGA
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaccactcgccctacgtctgtccgccgcctcggccacgttggccctggcggcc
gcggccggtgtggcggcgctgtcgatgcccgcggcgtcggccgcgaccggcggagtcacc
gggtacgcgacgcagaacgggggcaccaccggcggagccggtgggcagacggtcaaggcc
accaccggaacccagatccacgcggcgctctgcggccgggccagcagcagcacgccgatc
gtcatccaggtcgagggcaccatcaaccacggcaacaccgcgaaggtctcgggcgacagc
tgcaacaccgccgccggtgtgatcgagctgaagcagatcagcaatgtgaccatcgtcgga
gtcggcggcggggccgtcttcgatcaactgggcatccacatccgtgaatccagcaacatc
atcatccagaacgtcacggtccggaacgtgaagaagtcgggctcaccgacatccaacggc
ggcgacgcgatcggcatggagggcgacgtccgcaacgtgtgggtcgaccacgccaccctg
gaggcgtcgggaggcgagtcggagggttacgacggcctcttcgacatgaaggacaacacc
cagtacgtgacgctgtcctacagcattctgcgcaactcgggccggggcggcctcatcggg
tccagcgagagcgatctctccaacgggtacgtcaccttccaccacaacctgtactcgaac
atcgactcccgcgcccccctgctgcgcggcggcaccgcccacgcctacaacaaccactac
gtgagcctgaacgagtccggcatcaactcccgcgccggcgccaaggccaaggtggacaac
aattacttcgaggactccaaggacgtcctcggcaccttctacaccgaccagcgcggctcc
tggcaggtcagcggcaatgtcttcgacaacgtgacctggtcctccccgggttccgacaac
taccccgccgggcccaacccgacgtccaacaccacggtcagcattccgtacgccttcacg
ctcgacgccgccacctgcgtgcccgacgtcgtgagccgcacggcgggcgcgggcaccggg
ctcaaggtgtccgacggcaactgcaccccccagacgccgaacccgaccccgaccacgccg
accccgacacccacccccaccccaacgccgacgccgactccgacccagccgaccgggacc
aacctcagcatcggtgccggtgccgacggctccagcaaggccgacggcacgagctacggc
aacgtccgggacggcgacatgggcacctattggtcgcccagcggctccaccgggtccgtc
tccgtcaagtggggctccgccaccaccgtggccaaggtcaacatccgtgaggcggccggt
tccaccggcgccatcggctcctggcggctcctcaacgccgacacgggcgccgtactgacc
tccggaaccggcgcgggcgtgatcaccgtcccgcagacctcgctgaagaagatcaccttc
gagatcaccggttcctcggccaccccgaaggtggccgagttcgagacctacggcgcgtag
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