Streptomyces cinnabarinus: STRCI_001207
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Entry
STRCI_001207 CDS
T08957
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
scir
Streptomyces cinnabarinus
Brite
KEGG Orthology (KO) [BR:
scir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scir03400
]
STRCI_001207
DNA repair and recombination proteins [BR:
scir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
STRCI_001207
Archaeal homologous recombinant proteins
STRCI_001207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
SMC_N
AAA_29
AAA
Motif
Other DBs
NCBI-ProteinID:
WAZ20110
LinkDB
All DBs
Position
complement(1410749..1413742)
Genome browser
AA seq
997 aa
AA seq
DB search
MRLHRLDITAFGPFGGSQSVDFDELSAAGLFLLHGPTGAGKTSVLDAVCYALYGSVPGAR
QSGQGLALRSDHAAPGTRTEIRLELTVAGRRLEVTRQPPWERPKKRGSGTTLDKAQSWLR
EHDATTGTWKDLSRSHQEIGEEITQLLGMSREQFCQVVLLPQGDFARFLRADAEARGRLL
GRLFDTHRFAEVEKRLAERRRAAEAEVREGDAALLADAHRMQQAADGAMELPELTPGEPG
LADAVLTAAAVARSSAREELTVAHCRLAAAESAQAAAERALDDVRELARLQRRFAEARER
AGLLQERADAHREAQARMERARKAEAVAPALELRDAADAEHRRAALARTRAGALLPDTFA
DAGAAGLAAAARRAAEELGGLESARRAEQRLAELAEERAGLDRQERADEDVLEETGAWLA
GWEATRADVQSRIDAAQDAATRAEQLSVQREPAAKRLKAARLRDQLAGDTDTAAHRARRA
QEETLTAKAHWLEVKERRLNGIAAELAAQLTAGEPCAVCGATEHPAPARKDAGHVGREVE
EQALAAYQTAEERQAEQERRLGVVREALAAATAEAGDTPTGQLADEVAELERDFAQARRD
ASALHPAHEELRRAEQEHERRATARRQAEVTSAARVGHRDQLDRERTALETELAEARGAL
DSVAARSAQLERQVALLTDAADSARAAEDSAQRLKDADARLADAAFRAGFDSPQAAADAL
LDDTAHRELQRRLDAWQSEEAAVRAVLAEADTAAAAQRPPADLAAAEQAAAGAGRRLRDT
ASARDAAARRCTELDRLSVRATQGVRRLAPLRTQYDRVARLAALTAGTSADNERKMRLES
YVLAARLEQVAAAATVRLRRMSSGRYTLVHSDDRAGRGRSGLGLHVVDAWTGRERDTATL
SGGETFFASLALALGLADVVTDEAGGVRLDTLFIDEGFGSLDDQTLDEVLDVLDSLRERD
RSVGIVSHVADLRRRIHAQLEVVKGRSGSTLRQRGGG
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
gtgaggctgcaccggctcgacatcacggccttcggacccttcggcggctcccagagcgtc
gacttcgacgaactgtcggcagccggactgttcctgctgcacggccccaccggcgccggg
aagacctccgtcctcgacgccgtctgctacgcgctgtacggctccgtgcccggcgcccgg
cagtccggccagggactcgcgctgcgcagcgaccacgccgctcccggcacgcgcaccgag
atccgcctggaactgaccgtcgccggacgccggttggaggtcacccggcagccgccctgg
gagcgccccaagaagcggggttccggcacgaccctggacaaggcgcagagctggctgcgc
gagcacgacgccacgaccggcacctggaaggacctcagccgctcccaccaggagatcggc
gaggagatcacccagctgctcgggatgagccgcgaacagttctgccaggtcgtcctgttg
ccccagggcgacttcgcgcgcttcctgcgcgccgacgccgaggcgcgcggccggctgctg
gggcggctcttcgacacccaccgcttcgccgaggtggagaagcggctcgccgagcgccga
cgcgcggccgaggccgaggtgcgcgagggtgacgccgcgctgctggccgacgcgcaccgc
atgcagcaggcggcggacggcgccatggagctgcccgagctgacaccgggcgaaccgggg
ctcgccgacgccgtgctgaccgccgccgccgtggcccgcagctccgcgcgcgaggaactg
accgtcgcccactgtcgcctcgccgccgccgagtccgctcaggccgccgccgagcgcgcc
ctggacgacgtacgcgaactcgcccgtttgcagcggaggttcgccgaggcgagggagcgg
gcagggctgcttcaggagcgggcggacgctcaccgggaggcgcaggcgcgcatggagcgg
gcccgaaaggccgaggcggtggcacccgcgctggagctgcgggacgccgccgacgccgag
caccggcgggccgcgctcgcccggacccgcgcgggcgcgctgctgccggacactttcgcc
gacgccggtgccgccggactcgcggccgccgcgcgccgggccgccgaggagctgggcggc
ctggagtcggcccgccgggcggagcagcggctggccgaactcgccgaggagcgtgccggt
ctcgaccgccaggagcgcgccgacgaggacgtccttgaggagaccggggcctggctcgcc
gggtgggaggccacgcgcgcggacgtgcagtcccggatcgacgccgcgcaggacgccgcc
acccgcgccgaacagctctccgtgcagcgggagcccgcggccaagcggctcaaggcggcc
agactgcgggaccagttggccggggacaccgacacggccgcgcaccgggcccggcgtgcc
caggaggagacactgacggcaaaggcgcactggctggaggtcaaggagcgccgtctgaac
ggcatcgcggccgaactcgcggcccagctgaccgccggtgaaccgtgcgcggtctgcggt
gccaccgagcacccggcgcccgcgcgcaaggacgccgggcacgtcggccgtgaggtcgag
gagcaggccctcgccgcctaccagacggcggaggagcgccaggccgaacaggagcggcgc
ctgggcgtcgtacgcgaggcgctggccgccgccaccgccgaggccggggacaccccgacc
ggtcaactcgccgatgaggtcgccgagttggagcgggacttcgcgcaggcccgccgggac
gcctccgcgctccaccccgcgcacgaggaactgcgccgtgccgagcaggagcacgagcgg
cgcgccacggcccgtcggcaggcggaggtcacaagcgccgcccgggtcggccaccgggac
cagctggaccgcgaacggaccgcgctggaaacggagctggccgaggcgcgcggcgccctg
gacagtgtggctgcccgctccgcccaactggaacgccaggtcgcgctgctgaccgacgcc
gccgacagcgcccgcgccgcggaggacagcgcccagcggctcaaggacgccgacgcgcgc
ctcgccgacgccgcgttccgcgccgggttcgactctccgcaggccgccgccgacgcgctg
ctcgacgacaccgcccaccgcgaactccaacggcggctggacgcctggcagtccgaggag
gccgccgtacgcgccgtcctcgccgaggccgacaccgcggccgccgcccagcgcccgccc
gccgacctcgcggcggcggagcaggccgccgccggggcgggccgacgcctgcgcgacacc
gcctccgcgcgggacgccgccgcccggcgctgcaccgaactcgaccgcctctccgtccgc
gcgacacagggtgtacgacggctcgcgccgctgcgcacccagtacgaccgcgtggcccgg
ctcgccgcgctcacggcgggcacctcggcggacaacgagcgcaagatgcgcctggagtcc
tacgtcctggccgcccgcctggaacaggtcgccgccgccgcgaccgtgcgcctgcgccgg
atgtcgtccggccgctacaccctcgtccactccgacgaccgcgccggacgcggccgcagc
ggcctcggtctgcatgtcgtggacgcctggaccgggcgggagcgggacacggcgacgctg
tccggcggcgagaccttcttcgcctccctcgccctggccctcgggctcgcggacgtcgtc
accgacgaggcgggcggggtgcgccttgacacgctcttcatcgacgagggcttcggcagc
ctcgacgaccagaccctcgacgaggtcctcgacgtgctcgactcgctgcgcgagcgcgac
cgcagcgtgggcatcgtgagccatgtcgccgatctgcggcgccggatccacgcccagctg
gaggtcgtgaagggacgctcggggtcgacgctgcggcagcggggcggcggctga
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