Streptomyces cinnabarinus: STRCI_001397
Help
Entry
STRCI_001397 CDS
T08957
Name
(GenBank) glycoside hydrolase family 43 protein
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
scir
Streptomyces cinnabarinus
Pathway
scir00520
Amino sugar and nucleotide sugar metabolism
scir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
STRCI_001397
Enzymes [BR:
scir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
STRCI_001397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
GH43_C2
Motif
Other DBs
NCBI-ProteinID:
WAZ20291
LinkDB
All DBs
Position
complement(1554143..1555642)
Genome browser
AA seq
499 aa
AA seq
DB search
MRMYDNPVLPGFHPDPSVCRVGADYYMVCSSFEYFPALPVFHSRDLVNWRQIGNVLDRAG
QFEVPEDLAVSDGIYAPTIRHHDGRFHVITTHVGGGGNFLVTAERPEGPWSDPVWIDLPG
IDPDLAWDEDGTCWSAVAGVGLARIDPAAGKVLDGPVPVWSGSGMADPEGPHLYRIGEWW
YLMVAEGGTADGHSVSIARARSPRGPFEPAPHNPVLSHRSTGLPIQCTGHADLVQAADGS
WWMVLLGTRPRGFFPKFHVLGRETFLVPVEWADGWPCVGTVRERYEAPAALHPFPPEPAR
DDFDAPALAPHLISPRRRPDGAWSLAERPGWLTLHATGDSLDRPGHTFVGRRQQHHDCRV
ATRVDPGQGRAGLSVRMDEAHHYDIEVCRGTVSVLARIGPVRQCVAQLVVPEGPVTLAVE
FCSADAPRPAEGVRAGGPDTVAFSVESSDGGATVAELDGRYLSTQVAGGFTGRVIGMYVT
EGSAGFDWFEYIGRGAADR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgcggatgtacgacaaccccgtcctccccggcttccaccccgaccccagcgtgtgccgg
gtcggggcggactactacatggtgtgctccagtttcgagtacttccccgcgctgccggtc
ttccacagccgggatctcgtgaactggcgtcagatcggcaatgtcctcgaccgtgcgggg
cagttcgaggtgccggaggacctggcggtctccgacgggatctatgcgccgacgatccgt
catcatgacggccgcttccacgtcatcaccacccatgtgggcggcgggggcaacttcctc
gtcaccgccgagcgtcccgagggtccctggtcggacccggtgtggatcgacctgcccggc
atcgatcccgacctggcctgggacgaggacggcacctgctggagcgccgtcgcgggggtg
gggctcgcgcggatcgaccccgcggcggggaaggtgctcgacgggccggtgccggtctgg
tcggggtcgggcatggcggaccccgaagggccgcatctgtaccgcatcggggagtggtgg
tacctcatggtcgccgagggcggcaccgcggacgggcacagtgtgtccatcgcccgcgcc
cgctcacccaggggccccttcgaaccggccccgcacaaccccgtgctctcccaccgcagc
accggactgcccatccagtgcaccggtcacgcggacctcgtccaggcggccgacggcagt
tggtggatggtgctgctcgggacgcggccgcgcgggttcttccccaagttccatgtcctc
ggccgggagaccttcctggtccccgtggagtgggcggacggctggccctgcgtcggcacc
gtgcgcgagcgctacgaggcgcccgccgccctgcacccgttcccgccggagcccgctcgc
gacgacttcgacgcccccgccctcgccccgcacctcatctccccgcgccgccgccccgac
ggcgcctggtcgctggccgagcgcccgggatggctcaccctgcacgccaccggtgacagc
ctcgaccggcccggccacaccttcgtgggccgtcggcagcagcaccacgactgccgggtg
gcgacccgggtggacccggggcaagggcgcgctggtctgtcggtgcggatggacgaggcc
catcactacgacatcgaggtgtgccggggcacggtcagtgtgctcgcccggatcgggccg
gtccggcagtgcgtggcccaactcgtcgttccggaagggccggtgaccctggccgtggag
ttctgctcggccgacgcgccgcgtcccgcggagggcgtccgggccggcgggcccgacacg
gtcgccttctcggtcgaaagctccgacggcggggcgaccgtggccgagctcgacggacgc
tatctctccacccaggtcgcgggtggcttcaccgggcgggtgatcggcatgtacgtcacc
gagggcagcgcgggtttcgactggttcgagtacataggccggggcgcggcggaccgctga
DBGET
integrated database retrieval system
