Streptomyces cinnabarinus: STRCI_002186
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Entry
STRCI_002186 CDS
T08957
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
scir
Streptomyces cinnabarinus
Pathway
scir03030
DNA replication
scir03410
Base excision repair
scir03420
Nucleotide excision repair
scir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STRCI_002186 (polA)
03410 Base excision repair
STRCI_002186 (polA)
03420 Nucleotide excision repair
STRCI_002186 (polA)
03440 Homologous recombination
STRCI_002186 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scir03032
]
STRCI_002186 (polA)
03400 DNA repair and recombination proteins [BR:
scir03400
]
STRCI_002186 (polA)
Enzymes [BR:
scir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STRCI_002186 (polA)
DNA replication proteins [BR:
scir03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
STRCI_002186 (polA)
DNA repair and recombination proteins [BR:
scir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
STRCI_002186 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
STRCI_002186 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
HHH_2
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
WAZ21032
LinkDB
All DBs
Position
complement(2416522..2419251)
Genome browser
AA seq
909 aa
AA seq
DB search
MAETASKKTETTSGGGRPRLMLMDGHSLAYRAFFALPAENFTTATGQPTNAIYGFASMLA
NTLRDEAPTHFAVAFDVSRKTWRSEEFTEYKANRSKTPDEFKGQVELIGELLDAMHVSRF
AVDGFEADDVIATLATQAEAEGFEVLIVTGDRDSFQLVSEHTTVLYPTKGVSELTRFTPE
KVIEKYGLTPAQYPDFAALRGDPSDNLPGIPGVGEKTAAKWINQFGSFAELVERVEEVKG
KAGQNLRDHLEAVKLNRRLTEMVRTVELPKTVTDLERAAYDRKGVAMVLDTLEIRNPSLR
ERLLAVDPGAEEAEETQVVAEGVELDGQVLATGELAPWLTEHATAQPLGVATVDTWALGT
GSVAEVALATAGGPAAWFDPSELDEADETAFTGWLADAARPKVFHNAKGAMRVFAEHGWS
VDGVTMDTALAAYLVKPGRRSFDLDALSLEYLHRELAPAATADGQLAFGADDGAEAEALM
VQARAVLDLGEAFEARLEEVGAADLLRDMELPTSALLARMERHGIAADRAHLEAMEQMFA
GAVQQAVKEAHAAAGHEFNLGSPKQLQEVLFGELGLPRTKKTKTGYTTDADALAWLAGQT
ENELPVIMLRHREQAKLRVTVEGLIKTIAADGRIHTTFNQTVAATGRLSSTDPNLQNIPV
RTDEGRAIRRGFVVGEGFESLMTADYSQIELRVMAHLSADEGLIQAFTSGEDLHTTAASQ
VFAVEPGAVDAEMRRKIKAMSYGLAYGLSAFGLSQQLNIEAGEARALMDAYFERFGGVRD
YLRRAVDEARATGYTATLFGRRRYLPDLNSDNRQRREAAERMALNAPIQGTAADIVKIAM
LKVDAALREADLKTRMLLQVHDEIVLEVAPGEREQAEALVREQMSNAVSLDVPLGVSVGD
GGDWESAAH
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
gtggcagagacagcatcgaagaagaccgaaacgacctccggcggcggccgtccgcgactc
atgctcatggacgggcattccctggcctaccgcgcgttcttcgcgttgcccgcggagaac
ttcacgaccgcgaccggccagccgacgaacgcgatctacggcttcgcgtcgatgctggcc
aacaccctgcgcgacgaggcgcccacgcacttcgcggtcgccttcgacgtgtcccgcaag
acctggcggtccgaggagttcacggagtacaaggcgaaccgctccaagaccccggacgag
ttcaagggccaggtcgagctgatcggcgagctgctcgacgcgatgcacgtctcccgattc
gcggtggacggcttcgaggccgacgacgtgatcgccacgctcgccacccaggccgaggcc
gagggcttcgaggtgctgatcgtcaccggcgaccgcgactccttccagctcgtcagcgag
cacacgaccgtcctctacccgacgaagggcgtctccgagctgacccggttcaccccggag
aaggtcatcgagaagtacgggttgacgcccgcgcagtaccccgacttcgccgccctgcgc
ggcgacccgtccgacaacctgccgggcatcccgggcgtcggcgagaagaccgccgcgaag
tggatcaaccagttcggctcgttcgcggagctggtcgagcgggtcgaggaggtcaagggc
aaggcgggccagaacctccgcgaccacctggaggcggtcaagctcaaccgccgcctcacc
gagatggtgcgcaccgtcgagctgccgaagacggtcaccgacctggagcgggccgcgtac
gaccgcaagggcgtcgcgatggtcctggacacactggagatccgcaacccgtccctgcgg
gagcggctgctggccgtcgaccccggcgccgaggaggccgaggagacccaggtcgtcgcg
gagggcgtggagctggacggccaggtgctggccaccggcgagctggccccctggctgacc
gagcacgccaccgcacagcccctcggtgtcgccaccgtcgacacctgggcgctgggcacc
ggctcggtcgccgaggtcgcgctggccacggccggcggccccgccgcctggttcgacccg
tccgagctggacgaggccgacgagacggcgttcaccggctggctggccgacgccgcccgc
cccaaggtcttccacaacgccaagggcgcgatgcgggtcttcgccgagcacggctggagc
gtggacggcgtcaccatggacaccgccctcgccgcctacctggtcaagccgggccgccgc
tccttcgacctggacgcgctgtccctggagtacctccaccgcgagctggcccccgccgcc
acggccgacggccagctcgccttcggcgcggacgacggcgccgaggccgaggcgctgatg
gtgcaggcccgtgccgtcctcgacctgggcgaggccttcgaggcccgtcttgaggaggtc
ggcgccgccgatctgctgcgcgacatggagctgcccacctccgccctgctggcccggatg
gaacggcacggcatcgccgccgaccgcgcccacctggaagccatggaacagatgttcgcc
ggtgcggtgcagcaggccgtgaaggaggcccacgcggcggccgggcacgagttcaacctc
ggctcgcccaagcagctccaggaggtcctcttcggcgagctgggcctgcccaggaccaag
aagaccaagaccggctacaccaccgacgccgacgccctggcctggctcgccggacagacc
gagaacgagctcccggtgatcatgctccgccaccgtgagcaggcgaagctgcgggtcacc
gtcgagggcctgatcaagacgatcgccgcggacggccggatccacaccaccttcaaccag
acggtcgccgcgaccggccggctgtcctccacggaccccaacctccagaacatccccgtt
cgcacggacgagggccgcgcgatccgccgcggcttcgtggtcggcgagggcttcgagtcc
ctgatgacggccgactacagccagatcgagctgcgcgtgatggcccacctctccgccgac
gagggcctcatccaggccttcacctcgggcgaggacctgcacaccacggccgcctcgcag
gtcttcgcggtcgagcccggcgcggtcgacgcggagatgcgccgcaagatcaaggcgatg
tcctacggcctggcgtacggcctctcggccttcggtctctcccagcagctgaacatcgag
gcgggcgaggcacgcgccctcatggacgcctacttcgagcgcttcggcggtgtgcgggac
tatctgcgccgagccgtcgacgaggcccgcgcgaccggctacacggcgaccctcttcggc
cgccgccgctacctccccgacctcaacagcgacaaccgccagcgccgtgaggcggccgag
cgcatggcgctgaacgccccgatccagggcacggcggccgacatcgtcaagatcgccatg
ctcaaggtcgacgcggcgctccgcgaggccgacctgaagacccgcatgctcctccaggtc
cacgacgaaatcgtcctggaggtggccccgggcgagcgggagcaggcggaggccctggtc
cgggagcagatgtccaacgcggtgagcctggacgtaccgctcggggtgtcagtgggcgac
ggaggcgactgggagtcggcagcgcactag
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integrated database retrieval system
