Streptomyces cinnabarinus: STRCI_002848
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Entry
STRCI_002848 CDS
T08957
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
scir
Streptomyces cinnabarinus
Pathway
scir03030
DNA replication
scir03430
Mismatch repair
scir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STRCI_002848 (holA)
03430 Mismatch repair
STRCI_002848 (holA)
03440 Homologous recombination
STRCI_002848 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scir03032
]
STRCI_002848 (holA)
03400 DNA repair and recombination proteins [BR:
scir03400
]
STRCI_002848 (holA)
Enzymes [BR:
scir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STRCI_002848 (holA)
DNA replication proteins [BR:
scir03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
STRCI_002848 (holA)
DNA repair and recombination proteins [BR:
scir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
STRCI_002848 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
WAZ21660
LinkDB
All DBs
Position
complement(3158239..3159225)
Genome browser
AA seq
328 aa
AA seq
DB search
MAKKTAADDLLAPVTLAVGQEELLLDRAVQEVVRAAKAADADTDVRDLSSEQVQPGTLAE
LTSPSLFAERKVVVVRNAQDLSADTVKDVKAYLTAPAEEITLVLLHAGGVKGKGLLDAAR
KAGAREVACPKMTKPADRLAFVRQEFRATGRSATPEACQTLVDAIGSDLRELASAVSQLV
ADVEGTIDEAVVGRYYTGRAEASSFTVADRAVEGRAAEALEALRWSLATGVAPVLITSAL
AQGVRAIGKLSSARGGRPADLARELGMPPWKIDRVRQQMRGWTPDGVALALRAVAEADAG
VKGGGDDPEYALEKAVVTIARAARSRGR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaagactgctgctgatgacctgctcgcccccgtgactcttgccgtggggcag
gaggagttgttgctcgaccgggctgtgcaggaggttgtgcgggccgccaaggcggctgat
gccgataccgacgtgcgggatctgagttccgagcaggtgcagccggggaccctcgccgag
ctgaccagtccctcgctcttcgccgagcgcaaggtcgtcgtcgtgcgcaacgcccaggat
ctgtccgccgacaccgtcaaggacgtcaaggcgtatctcacggcgcccgccgaggagatc
accctcgtgctgctccacgccggtggggtcaagggcaaggggctgctcgacgccgcccgg
aaggccggggcccgggaggtcgcctgccccaagatgaccaagcccgcggatcggctggcg
ttcgtgcggcaggagttccgggccaccggccggtccgccacgcccgaggcgtgccagacg
ctggtcgacgccatcggcagcgatctgcgggagctggcgtccgccgtgtcgcagctggtc
gccgatgtcgaggggaccatcgacgaggccgtggtcgggcggtactacaccgggcgggcc
gaggcctccagcttcaccgtcgccgaccgggccgtcgaggggcgggccgcggaggcgctg
gaggcgttgcgctggtcgctggccacgggcgtggcgcccgtcctgatcaccagcgccctg
gcacagggcgtccgggccatcggcaagctgtcctccgcgcgcggtgggcgtcccgccgat
ctcgcccgtgagctgggcatgccgccctggaagatcgaccgggtacgccagcagatgcgc
ggctggacccctgacggcgtcgccctcgccctgcgcgccgtcgccgaggccgacgccgga
gtcaagggcggcggggacgatcccgagtacgccctggagaaggcggtcgtcacgatcgcg
agggcggcccgctccagaggccgctga
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