Entry |
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Name |
(GenBank) DNA polymerase III subunit gamma and tau
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KO |
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Organism |
scir Streptomyces cinnabarinus
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:scir00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STRCI_003973
03430 Mismatch repair
STRCI_003973
03440 Homologous recombination
STRCI_003973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:scir03032]
STRCI_003973
03400 DNA repair and recombination proteins [BR:scir03400]
STRCI_003973
Enzymes [BR:scir01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STRCI_003973
DNA replication proteins [BR:scir03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
STRCI_003973
DNA repair and recombination proteins [BR:scir03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
STRCI_003973
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(4411206..4413455)
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AA seq |
749 aa
MSSLALYRRYRPESFAEVIGQEHVTDPLQQALRNNRVNHAYLFSGPRGCGKTTSARILAR
CLNCEQGPTPTPCGECQSCQDLARNGPGSIDVIEIDAASHGGVDDARELREKAFFGPASS
RYKIYIIDEAHMVTSAGFNALLKVVEEPPEHLKFIFATTEPEKVIGTIRSRTHHYPFRLV
PPGTLRDYLAEVCGREKIPVEDGVLPLVVRAGAGSVRDSMSVMDQLLAGAREDGVTYAMA
TSLLGYTDGSLLDSVVESFATGDGAAAFEVVDRIIEGGNDPRRFVADLLERLRDLVILAA
VPDAVEKGLLDAPADVLERMQAQAGTFGAAELSRAADLVNEGLTEMRGATSPRLQLELIC
ARVLLPAAYGDQRSVMARLDRLERGVSFSGGAGTPAMGYAPGPEAHRPEAHVPEAHGSAH
PAPAAVPPGGGPAAARAAVRGAGPATPAPQPQPYAPAAPQPPAPVAEQPPAPQAPQPQQP
PAPAAAPAPAPEPTPAPAAPGAWPTATTAGSGRRPGGWPTATPAGTGSQPAPTPTPSAPA
PAPQTAPPPAPTPAAAPVGGLDPRTLWPNILEAVKNRRRFTWILLSQNAQVTGFDGTTLQ
LGFVNAGARDNFASSGSEDVLRQALAEQFSVQWKVEAIIDPSGGGSAPPQGGYGGGGGYG
GGGATTAPSRPAPPQPASPGPTPAAPAPAAPAQAAPPAPVSPPPAPTPVAPEDDIPEDDD
PDLNESALSGHDLIVRELGATVVEEFTNE |
NT seq |
2250 nt +upstreamnt +downstreamnt
gtgtcgtctctcgcgctgtaccgccgctatcgcccggagtcgttcgccgaggtcatcggg
caggagcatgtcaccgacccgttgcagcaggcgctgcggaacaaccgggtcaatcacgcg
tacctgttcagcgggccgcgtggctgcggcaagacgaccagcgctcggatcctcgcccgc
tgtctgaactgtgagcaaggtcccacgcccaccccgtgcggcgagtgccagtcgtgccag
gacctggcccggaacggccccgggtccatcgacgtcatcgagatcgacgccgcctcgcac
ggtggcgtggacgacgcccgtgagctgcgcgagaaggcattcttcggacccgcgagcagc
cgctacaagatctacatcatcgacgaggcccacatggtcacgtcggcgggcttcaacgcg
ctgctcaaggtcgtcgaggagccgcccgagcatctgaagttcatcttcgccaccaccgag
cccgagaaggtcatcgggaccatccggtcgcggacccaccactacccgttccggctggtg
ccgcccggcaccctgcgggactacctcgccgaggtctgcggacgcgagaagatccccgtc
gaggacggcgtgctcccgctcgtcgtccgcgcgggcgccggttccgtgcgtgactccatg
tccgtcatggaccagctcctcgccggtgcgcgggaggacggtgtgacgtatgccatggcc
acctccctcctcggctacaccgacggctccctcctcgactccgtcgtggagtccttcgcc
accggtgacggcgccgccgccttcgaggtcgtcgaccggatcatcgagggcggcaacgac
ccccgccggttcgtcgccgatctgctggagcggctgcgcgacctcgtgatcctcgccgcc
gtcccggacgccgtcgagaaggggctgctcgacgccccggccgacgtcctggagcgcatg
caggcccaggccggcaccttcggcgccgccgagctcagccgcgccgccgacctcgtcaac
gagggcctgaccgagatgcggggcgccacctccccgcggctccagctcgaactgatctgc
gcgcgcgtgctgctccccgccgcctacggggaccagcgttccgtcatggcccgtctggac
cggctggagcggggcgtcagcttctcgggcggcgcgggcacgcccgcgatgggctacgcc
cccgggcccgaagcccataggccggaagcccatgtgccggaagcccacgggtcggcacac
ccggctccggccgccgtcccacccggcggcggcccggcggcggcccgtgcggcggtacgg
ggggcgggccccgcgactccggctccgcagccccagccctacgcaccggcggcgccccag
ccccccgccccggtcgccgagcagccccctgctccccaggcgccccagccccagcagccc
cctgccccggcagcggcccccgctccggcccccgagcccaccccggccccggccgccccc
ggcgcctggcccaccgccaccaccgccggcagcggtcgccgtccgggcggctggcccacc
gcgacccccgcgggcaccggaagccagcccgcgcccacacccaccccgagcgccccggca
ccggcgccccagaccgcgcccccgcccgcccccacccctgccgccgcccccgtcggcggc
ctcgacccccgcacgctctggccgaacatcctggaggccgtcaagaaccgccgccgcttc
acctggatcctgctcagccagaacgcccaggtgaccggcttcgacggcacgaccctccag
ctcggcttcgtcaacgccggcgcccgcgacaacttcgcgagcagcggcagcgaggacgtc
ctgcgccaggcgctcgccgagcagttcagcgtccagtggaaggtcgaggcgatcatcgac
ccctcgggcggcggctccgcacccccgcagggcggctatggcggtggcggtggttacggc
ggtggcggcgctacgaccgccccctcgcgaccggcacctccccagccggcgtcccccggc
cccactcccgcggccccggcacccgccgcgcccgcacaagcggcgccccccgcccccgtg
tccccgcctcccgctccgaccccggtcgcccccgaggacgacatccccgaggacgacgac
ccggacctcaacgaatcggcactctccggccacgacctgatcgtccgcgaactgggcgcg
acggtggtcgaggagttcacgaacgagtag |