Streptomyces cinnabarinus: STRCI_003998
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Entry
STRCI_003998 CDS
T08957
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
scir
Streptomyces cinnabarinus
Brite
KEGG Orthology (KO) [BR:
scir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scir03021
]
STRCI_003998
Transcription machinery [BR:
scir03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
STRCI_003998
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_3
MarR
HTH_24
HTH_31
DUF7343
Motif
Other DBs
NCBI-ProteinID:
WAZ22713
LinkDB
All DBs
Position
4431026..4431913
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AA seq
295 aa
AA seq
DB search
MSAEQGSSKVLTLTKSEAAPALDNDVTALAEAAPAPALPASGAIDTRTLSRSLFLRLAAL
DENSPERAYVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERGV
EFPTFAMPTVVGEIKRFFRDTSWSVRVPRRLQELRLALTKASDELSQKLDRSPTVTELAA
VLGVSEEDVVDGLAVGNAYTASSLDSPAPEDDGGEGSLADRLGYEDSALEGVEYRESLKP
LLAKLPPRERRIIMLRFFANMTQSQIGEEVGISQMHVSRLLTRTLAQLREGLISD
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagaacagggcagctccaaggtgctcacgctcacgaagagcgaggctgcgccc
gcgctcgacaacgacgtaacggcccttgccgaagccgcgcccgccccggcccttccggcc
tccggggcgatcgacacccgcaccctgtcccgctccctgttcctgcggctcgccgcgctg
gacgagaacagccccgagcgcgcctacgtccgcgacaccctgatcgagctgaacctcccg
ctcgtccggtacgccgcggcccgcttccgctcccgcaacgagccgatggaggacatcgtc
caggtcggcaccatcgggctgatcaaggcgatcgaccgcttcgactgcgaacggggcgtg
gagttcccgacgttcgcgatgccgacggtggtcggcgagatcaagcggttcttccgcgac
acctcgtggtcggtgcgggtcccgcgccgcctccaggagctgcgcctggcgctgacgaag
gccagcgacgagctctcccagaagctggaccgctcgccgacggtcaccgaactcgccgcg
gtactgggcgtgtccgaggaggacgtggtcgacggcctggcggtcggcaacgcctacaca
gcctcctcgctggactccccggcccccgaggacgacggcggcgaaggctccctggcggac
cgcctcggctacgaggacagcgcgctggagggcgtcgagtaccgcgagtccctcaagccg
ctgctggccaaactcccgccccgtgagcggcggatcatcatgctgcgcttcttcgccaac
atgacccagtcccagatcggcgaggaggtcggcatctcccagatgcacgtctcccggctg
ctgacccggaccctggcccagctccgcgagggcctcatctccgactga
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