| Entry |
|
|---|
| Symbol |
gyrB
|
|---|
| Name |
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
|
|---|
| KO |
|
|---|
| Organism |
scir Streptomyces cinnabarinus
|
|---|
| Brite |
KEGG Orthology (KO) [BR:scir00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:scir03032]
STRCI_004165 (gyrB)
03400 DNA repair and recombination proteins [BR:scir03400]
STRCI_004165 (gyrB)
Enzymes [BR:scir01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
STRCI_004165 (gyrB)
DNA replication proteins [BR:scir03032]
Prokaryotic type
DNA Topoisomerases
STRCI_004165 (gyrB)
DNA repair and recombination proteins [BR:scir03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
STRCI_004165 (gyrB)
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
4603638..4605683
|
|---|
| AA seq |
681 aa
MADSGNPNENIPSTDAVAGVPEAGATAYDASAITVLEGLDAVRKRPGMYIGSTGERGLHH
LVQEVVDNSVDEALAGHADTIDVTILADGGVRVVDNGRGIPVGIVPSEGKPALEVVLTVL
HAGGKFGGGGYAVSGGLHGVGVSVVNALSTKVAVEVRTDGHRWTQDYKLGVPTAPLAKHE
ATEEHGTSVSFWADPDIFETTDYSFETLSRRFQEMAFLNKGLRINLTDERESAKATAGAD
EAGEDEKHDVKTVSYHYEGGIVDFVKYLNSRKGDVVHPTVIDLEAEDKDKLLSLEVAMQW
NSGYNEGVYSFANIIHTHEGGTHEEGFRAALTSLINKYARDKKLLREKDDNLTGDDIREG
LTAIISVKLSEPQFEGQTKTKLGNTEVKTFVQKVVYEHLADWLDRNPNEAADIIRKGIQA
ATARVAARKARDLTRRKGLLESASLPGKLSDCQSNDPTKCEIFIVEGDSAGGSAKSGRNP
QYQAILPIRGKILNVEKARIDKILQNQEIQALISAFGTGVHEDFDIEKLRYHKIILMADA
DVDGQHINTLLLTFLFRFMRPLVEAGHVFLSRPPLYKIKWGRDDVEYAYSDRERDALLEM
GRQRGKRVREDSIQRFKGLGEMNAEELRVTTMDVEHRVLGQVTLDDAAQADDLFSVLMGE
DVEARRAFIQRNAKDVRFLDI |
|---|
| NT seq |
2046 nt +upstreamnt +downstreamnt
gtggccgattccggcaaccccaacgagaacatcccgtccaccgacgccgtggcaggcgta
cccgaggcaggtgccacggcgtacgacgcgagtgccatcaccgtcctcgagggtctggac
gcggttcgcaagcgacccggtatgtacatcggttcgaccggcgagcgcggcctgcaccac
ctcgtgcaggaggtcgtcgacaactccgtcgacgaggcgctggcggggcacgcggacacg
atcgacgtgacgatcctcgccgacggcggtgtccgggtcgtcgacaacggccgtggcatc
ccggtgggcatcgtgccgtccgagggcaagccggcccttgaggtcgtgctgaccgtgctg
cacgcgggcggcaagttcggcggcggcggctacgcggtctccggcggtctgcacggcgtc
ggcgtctccgtggtgaacgccctgtcgacgaaggtcgccgtcgaggtcaggaccgacggc
caccgctggacgcaggactacaagctcggcgtcccgaccgccccgctggccaagcacgag
gccaccgaggagcacggcacctcggtctccttctgggccgacccggacatcttcgagacc
accgactactccttcgagacgctctcgcggcgcttccaggagatggcgttcctcaacaag
ggcctgcgcatcaacctcaccgacgagcgtgagtcggcgaaggccacggccggtgcggac
gaggcgggcgaggacgagaagcacgacgtcaagacggtctcgtaccactacgagggcggc
atcgtcgacttcgtgaagtacctcaactcccgcaagggggacgtggtgcaccccaccgtc
atcgacctggaggcggaggacaaggacaagctcctgtccctcgaggtcgcgatgcagtgg
aacagcggctacaacgagggcgtctactcgttcgccaacatcatccacacccatgagggc
ggcacccacgaagagggtttccgcgcggctctgacgagcctgatcaacaagtacgcgcgc
gacaagaagctgctgcgcgagaaggacgacaacctcacgggtgacgacatccgcgagggt
ctgaccgcgatcatctcggtgaagctgagcgagccgcagttcgagggccagaccaagacc
aagctgggcaacaccgaggtcaagaccttcgtgcagaaggtcgtctacgagcacctcgcg
gactggctggaccgtaacccgaacgaggccgcggacatcatccgcaagggcatccaggcg
gccaccgcgcgcgtggcggcccgcaaggcccgcgatctgacgcgtcgcaagggcctgctg
gagtcggcgtcgctgccgggcaagctgagcgactgccagtccaacgacccgaccaagtgc
gagatcttcatcgtcgagggtgactccgccggcggttcggccaagtccggccgcaacccg
cagtaccaggcgatcctcccgatccgaggcaagatcctcaacgtcgagaaggcgcggatc
gacaagatcctccagaaccaggagatccaggcgctgatctccgcgttcggcacgggtgtg
cacgaggacttcgacatcgagaagctccgctatcacaagatcatcctgatggcggacgcc
gacgtcgacggccagcacatcaacaccctgctgctgaccttcctgttccgcttcatgcgg
ccgctggtcgaggccggtcacgtgttcctgtcgcgtcctccgctctacaagatcaagtgg
ggccgggacgatgtggagtacgcgtactccgaccgcgagcgcgacgcgctgctggagatg
ggccgccagcgcggcaagcgggtccgtgaggactccatccagcgcttcaagggtctcggt
gagatgaacgccgaagagctgcgcgtgaccaccatggacgtcgagcaccgcgttctcggc
caggtcaccctcgacgacgccgcacaggccgacgacctgttctcggtcctgatgggcgag
gacgtcgaggcccgccgcgcgttcatccagcgcaacgccaaggacgtccgcttcctcgac
atctga |
|---|
