KEGG   Streptomyces cinnabarinus: STRCI_004635
Entry
STRCI_004635      CDS       T08957                                 
Name
(GenBank) RtcB family protein
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
scir  Streptomyces cinnabarinus
Brite
KEGG Orthology (KO) [BR:scir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:scir03016]
    STRCI_004635
Enzymes [BR:scir01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     STRCI_004635
Transfer RNA biogenesis [BR:scir03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    STRCI_004635
 Prokaryotic type
   tRNA splicing ligases
    STRCI_004635
SSDB
Motif
Pfam: RtcB
Other DBs
NCBI-ProteinID: WAZ23299
UniProt: A0ABY7KK83
LinkDB
Position
5120761..5121954
AA seq 397 aa
MSYVEMPGAKVPIRMWTDPTTVEDVALQQLRNVATLPWIKGLAVMPDVHYGKGATVGSVI
AMQGAVCPAAVGVDIGCGMSAVKTSLTANDLPGDLSRLRSKIEQAIPVGRGMHGDAVDPT
RMHGFGTAGWDDFWGRFDGIADAVKFRQERATKQMGTLGSGNHFVEVCTDTEGAVWLMLH
SGSRNIGKELAEFHIGVAQRLPHNQGLVDRDLAVFVADTPQMAAYRNDLFWAQEYAKYNR
SIMMALLKDVVRKEFKKAKPVFEPEISAHHNYVAEERYEGMDLLVTRKGAIRAGSGEYGI
IPGSMGTGSYIVKGLGNPLSFNSASHGAGRRMSRNAAKRRFSTKDLEEQTRGVECRKDSG
VVDEIPGAYKPIEQVIDQQRDLVEVVAKLKQVVCVKG
NT seq 1194 nt   +upstreamnt  +downstreamnt
atgtcgtacgtagagatgccgggcgcgaaggttccgatccggatgtggacggatccgacg
acggtggaggacgtggccctccagcagctgcggaatgtggcgaccctgccgtggatcaag
ggtctggcggtcatgccggacgtgcactacggcaagggcgcgacggtggggtccgtcatc
gcgatgcagggcgcggtgtgcccggccgcggtgggcgtggacatcggttgcggaatgtcg
gcggtgaagacgtccctgaccgcgaacgatctccccggtgacctgtcgcggctgcggtcg
aagatcgagcaggcgattccggtgggccgtggcatgcacggcgacgccgtcgacccgacc
cggatgcacggcttcggcacggccgggtgggacgacttctggggacgcttcgacgggatc
gcggacgcggtgaagttccggcaggagcgggccaccaagcagatggggacgctcggcagc
ggaaaccacttcgtcgaagtgtgcaccgacaccgagggtgccgtctggctgatgctgcac
tccggctcccgcaacatcggcaaggaactcgccgagttccacatcggcgtggcccagagg
ctcccgcacaaccagggcctggtcgaccgcgacctcgccgtcttcgtcgcggacaccccg
cagatggcggcgtaccgcaacgacctgttctgggcgcaggagtacgcgaagtacaaccgc
tcgatcatgatggcgctcctgaaggacgtggtccgcaaggagttcaagaaggccaagccg
gtcttcgagccggagatcagcgcgcaccacaactacgtggccgaggagcgctacgagggc
atggacctgctcgtgacccgcaagggcgcgatccgggccggctccggcgagtacgggatc
atcccgggctcgatgggcacgggttcgtacatcgtgaagggcctcggcaacccgctgtcc
ttcaactcggcctcgcacggcgcggggcggcgcatgagccgcaacgccgccaagcgccgc
ttctccaccaaggacctggaggagcagacgcggggcgtggagtgccgtaaggactccggt
gtcgtggacgagatcccgggcgcctacaagccgatcgagcaggtcatcgatcagcagcgg
gacctggtggaggtcgtggcgaagctgaagcaggtcgtctgcgtgaagggctga

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