Streptomyces cinnabarinus: STRCI_004952
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Entry
STRCI_004952 CDS
T08957
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
scir
Streptomyces cinnabarinus
Pathway
scir03420
Nucleotide excision repair
scir03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
STRCI_004952 (pcrA)
03430 Mismatch repair
STRCI_004952 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scir03400
]
STRCI_004952 (pcrA)
Enzymes [BR:
scir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
STRCI_004952 (pcrA)
DNA repair and recombination proteins [BR:
scir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
STRCI_004952 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
STRCI_004952 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
WAZ23601
LinkDB
All DBs
Position
5435877..5438354
Genome browser
AA seq
825 aa
AA seq
DB search
MSSLFDDSFLADLQAPRGREEEPPPPPEDEHAPESVPDDLFGGKFDVPPDRDDYYRDGAP
RPALDAAALIEGLNENQRAAVVHSGTPLLIVAGAGSGKTRVLTHRIAYLLAERNVHPGQI
LAITFTNKAAGEMKERVEQLVGPRANAMWVMTFHSACVRILRRESKKLGFTSSFSIYDAA
DSKRLMALVCRDLDLDPKRFPPKSFSAKISNLKNELIDEEDFAAQAGDGFEKTLAQAYAL
YQSRLREANALDFDDLIMTTVNLLRAFPDVAEHYRRRFRHVLVDEYQDTNHAQYALVREL
VGTSEHPVDVPPEAELPPAELCVVGDADQSIYAFRGATIRNILQFEEDYPDATTILLEQN
YRSTQTILTAANAVIERNESRRPKNLWTNAGAGARITGYVADTEHDEAQFVADEIDRLTD
AGDAKAGDVAVFYRTNAQSRVFEEIFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLANP
EDSVPLRRILNVPKRGIGERAEAMIDALSQRERISFPQALKRVDEAYGMAARSTNAVKRF
NTLMEELRTIVESGAGPATVLEAVLERTGYLAELQASTDPQDETRIENLQELAAVALEFE
QESEETPGGLADFLERVALVADSDQIPDEDEDGSGVITLMTLHTAKGLEFPIVFLTGMED
GVFPHMRALGQAKELEEERRLAYVGITRARERLYLTRSSLRSAWGQPSYNPPSRFLEEIP
AQHVDWKRTGATSPVSSGPASGVAASLSSSRSRSAASGASGFATRRTAEQPVVALAVGDR
VTHDQFGLGTVMAVKGTGANTEATIDFGDTKPKRLLLRYAPVEKL
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgatgacagcttcctggcggatcttcaggcccctcgtgggcgtgag
gaggagcctccgccgccgcccgaggacgagcacgctccggagtcggttccggacgatctg
ttcggtgggaagttcgacgtgccgccggaccgggacgactactaccgcgacggcgcccca
cgcccggcgctggatgccgccgcgctcatcgaggggctcaacgagaaccagcgcgcggcc
gtcgtccactccggcaccccgctgctcatcgtggccggcgccggttccggcaagacccgt
gtgctcacgcaccgcatcgcctatctcctcgccgagcggaacgtgcaccccggccagatc
ctcgcgatcaccttcaccaacaaagccgcgggcgagatgaaggagcgcgtcgagcagctc
gtcggcccgcgcgcgaacgcgatgtgggtgatgaccttccacagcgcctgcgtccgcatc
ctgcgccgcgagagcaagaagctcgggttcacctcgtcgttctcgatctacgacgccgcc
gactccaagcgtctgatggccctggtctgccgggacctcgacctcgaccccaagcggttc
ccgcccaagtccttcagcgccaagatcagcaacctcaagaacgagctgatcgacgaggag
gacttcgccgcccaggccggcgacggcttcgagaagaccctcgcccaggcgtacgcgctc
taccagtcgcggctgcgcgaggccaacgccctcgacttcgacgacctgatcatgacgacg
gtcaatctgctgcgcgccttcccggacgtcgccgagcactaccgccgccgcttccgccat
gtcctcgtcgacgagtaccaggacaccaaccacgcccagtacgccctcgtgcgcgagctg
gtgggcacctccgagcaccccgtcgacgtaccgcccgaggcggagctcccgcccgccgaa
ctgtgcgtcgtgggcgacgccgaccagtcgatctacgccttccgcggcgcgacgatccgc
aacatcctccagttcgaggaggactacccggacgcgacgacgatcctgctggagcagaac
taccgctccacgcagaccatcctgaccgccgccaacgcggtcatcgagcgcaatgagtcc
cgccgccccaagaacctgtggaccaacgcgggcgcgggcgcgcgcatcaccggctatgtc
gccgacaccgagcacgacgaggcccagttcgtcgccgacgagatagaccgcctcacggac
gcgggcgacgcgaaggccggcgacgtcgccgtcttctaccgcaccaacgcccagtcccgc
gtcttcgaggagatcttcatccgcgtcggcctgccctacaaggtcgtcggcggcgtccgc
ttctacgagcgcaaggaggtccgggacgtcctggcctacctgcgggtgctggccaacccc
gaggactcggtcccgctgcggcggatcctgaacgtccccaagcgcggcatcggcgagcgc
gccgaggcgatgatcgacgcgctctcccagcgggagaggatcagcttcccgcaggccctc
aagcgggtggacgaggcgtacggcatggccgcgcgctccacgaacgccgtcaagcggttc
aacacgctgatggaggagctgcggacgatcgtggagtccggcgccggacccgcgaccgtc
ctcgaagccgtcctcgaacgcaccggctatctggccgagttgcaggcatccaccgacccg
caggacgagacccggatcgagaacctccaggaactcgccgccgtggccctggagttcgag
caggagtcggaggaaaccccgggcgggctcgccgacttcctggagcgggtcgcgctcgtc
gccgactccgaccagatccccgacgaggacgaggacggctccggagtcatcaccctgatg
accctgcacaccgccaagggcctggagttcccgatcgtcttcctcaccggcatggaggac
ggcgtcttcccgcacatgcgcgccctcggccaggccaaggaactggaggaggagcgccgc
ctcgcctacgtcggcatcacccgcgcgcgggaacggctgtatctgacgcgctcgtcgctg
cgcagcgcgtgggggcagccgtcgtacaacccgccctcccgcttcctggaggagatcccg
gcgcagcacgtggactggaagcgcacgggtgccacctcgccggtgtcctccgggcccgcg
tcaggcgtggcggcctcgctgtcctcgtcccgctcccgctcggcggcgtccggcgcctcc
ggcttcgccacccgccgcaccgccgagcagccggtcgtcgcgctggccgtgggcgaccgg
gtgacgcacgaccagttcgggctcggcaccgtgatggcggtcaagggcactggcgccaac
accgaggcgacgatcgatttcggcgacaccaagccgaagcggctgctgctgcgctacgcg
ccggtggagaagctctag
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