KEGG   Streptomyces cinnabarinus: STRCI_004998
Entry
STRCI_004998      CDS       T08957                                 
Name
(GenBank) glycine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
scir  Streptomyces cinnabarinus
Pathway
scir00260  Glycine, serine and threonine metabolism
scir00460  Cyanoamino acid metabolism
scir00630  Glyoxylate and dicarboxylate metabolism
scir00670  One carbon pool by folate
scir00680  Methane metabolism
scir01100  Metabolic pathways
scir01110  Biosynthesis of secondary metabolites
scir01120  Microbial metabolism in diverse environments
scir01200  Carbon metabolism
scir01230  Biosynthesis of amino acids
scir01240  Biosynthesis of cofactors
scir04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:scir00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    STRCI_004998
  09102 Energy metabolism
   00680 Methane metabolism
    STRCI_004998
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    STRCI_004998
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    STRCI_004998
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    STRCI_004998
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    STRCI_004998
Enzymes [BR:scir01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     STRCI_004998
SSDB
Motif
Pfam: SHMT Aminotran_1_2
Other DBs
NCBI-ProteinID: WAZ23643
LinkDB
Position
5488888..5490336
AA seq 482 aa
MPEQPLSPESTAFRAALDVIRAVEPRVADAIGQEVHDQREMLKLIASENYASPATLLAMG
NWFSDKYAEGTIGRRFYAGCRNVDTVESLAAEHAKELFGARHAYVQPHSGIDANLVAFWS
VLAARVETPALEKAGVRQVNDLSDADWAELRQAFGNQRMLGMSLDAGGHLTHGFRPNISG
KMFDQRSYGTDPVTGLVDYEALRASAREFKPLIIVAGYSAYPRLVNFRIMREIADEVGAT
LMVDMAHFAGLVAGKVLTGDFDPVPHAQIVTTTTHKSLRGPRGGMVLCDDSLKDQVDRGC
PMVLGGPLPHVMAAKAVALAEARRPSFQDYAQRIVDNSRALAEGLMRRGATLVTGGTDNH
LNLIDVATSYGLTGRQAEAALLESGIVTNRNAIPADPNGAWYTSGIRIGTPALTTRGLGT
AEMDEVAGLIDRVLTTTEPGTTKSGAPSKASHVLDAKIADEISRRATDLVAGFPLYPEID
LG
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgcccgagcagcccctttcccctgaatccaccgccttccgcgccgccctcgacgtcatc
cgcgccgtggagccgcgggtcgccgacgccatcggccaggaggtgcacgaccagcgcgag
atgctcaagctgatcgcctccgagaactacgcctccccggccaccctgctggcgatgggc
aactggttcagcgacaagtacgccgagggcaccatcggccgccgcttctacgccggttgc
cgcaatgtcgacaccgtcgagtcgctcgccgccgagcacgccaaggaactcttcggcgcc
cgccacgcctacgtccagccgcactccggcattgacgccaacctggtcgccttctggtcc
gtgctcgccgcccgggtcgagaccccggccctggagaaggccggcgtccgccaggtcaac
gacctctccgacgccgactgggccgaactgcgccaggccttcggcaaccagcgcatgctc
ggcatgtccctggacgccggcggccacctcacccacggcttccgcccgaacatctccggc
aagatgttcgaccagcgctcctacggcaccgacccggtcaccgggctcgtggactacgag
gccctgcgcgcctccgcccgcgagttcaagccgctgatcatcgtcgccggctactccgcc
tacccccgcctggtgaacttccggatcatgcgggagatcgccgacgaggtcggcgcgacc
ctgatggtcgacatggcccacttcgcgggcctggtcgccggcaaggtcctcaccggcgac
ttcgacccggtcccgcacgcccagatcgtcaccaccaccacccacaagtcgctgcgcggc
ccgcgcggcggcatggtcctgtgcgacgactccctcaaggaccaggtcgaccgcggctgc
ccgatggtcctcggcggcccgctcccgcacgtcatggccgccaaggccgtagccctcgcc
gaggcccgccggccctccttccaggactacgcgcagcgcatcgtcgacaactcccgcgcc
ctcgccgagggcctgatgcgccggggcgcgaccctggtcacgggcggcacggacaaccac
ctgaacctgatcgacgtggccacctcctacggcctcaccggccgccaggccgaggcggcg
ctgctggagtccggcatcgtcaccaaccgcaacgccatccccgccgaccccaacggcgcc
tggtacacctccggcatccgcatcggcaccccggccctgaccacccgtggtctcggcacc
gccgagatggacgaggtcgccggtctcatcgaccgcgttctcaccaccacggagcccggc
accaccaagtccggcgccccctccaaggcctcccacgtcctcgacgcgaagatcgcggac
gagatctcccgccgggcgaccgacctggtggccggtttcccgctctacccggagatcgac
ctcggctga

KEGG   Streptomyces cinnabarinus: STRCI_005524
Entry
STRCI_005524      CDS       T08957                                 
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
scir  Streptomyces cinnabarinus
Pathway
scir00260  Glycine, serine and threonine metabolism
scir00460  Cyanoamino acid metabolism
scir00630  Glyoxylate and dicarboxylate metabolism
scir00670  One carbon pool by folate
scir00680  Methane metabolism
scir01100  Metabolic pathways
scir01110  Biosynthesis of secondary metabolites
scir01120  Microbial metabolism in diverse environments
scir01200  Carbon metabolism
scir01230  Biosynthesis of amino acids
scir01240  Biosynthesis of cofactors
scir04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:scir00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    STRCI_005524
  09102 Energy metabolism
   00680 Methane metabolism
    STRCI_005524
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    STRCI_005524
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    STRCI_005524
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    STRCI_005524
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    STRCI_005524
Enzymes [BR:scir01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     STRCI_005524
SSDB
Motif
Pfam: SHMT Aminotran_1_2 DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: WAZ24131
LinkDB
Position
6063070..6064308
AA seq 412 aa
MSVSPVLEADVLRRQDPELAEILLGERERQASTLQLIAAENFTSPAVLAALGSPLANKYA
EGYPGARHHGGCEIVDVAERIAVDRAKGLFGAEHANVQAHSGSSAVLAAYAALLRPGDTV
LALGLPYGGHLTHGSPANFSGRWFDFVPYGVDAETGLLDHEQVRTLARSHRPKAIVCGSI
CYPRHIDYAFFREVADEVGAYLIADAAHPIGLVAGGAAPSPLPYADIVCATTHKVLRGPR
GGMILCGAELAERVDRAVFPFTQGGAQMHTIAAKAVAFGEAATPAFTAYAHQVVANARVL
AAGLAAEGLVVTTGGTDTHLITADPAPLGVDGRTGRGLLAAAGIVLDCCALPHGDSRGLR
LGTAALTTQGMGEQEMAQVSALIAGVLRGEAEAVRAREEVRDLAGGFPPYPG
NT seq 1239 nt   +upstreamnt  +downstreamnt
atgtcggtcagccctgtcctagaggccgatgtcctgcgtcggcaggatcccgagctggcg
gagatcctgctcggggaacgggagcggcaggcgagcaccctgcagctgatcgccgccgag
aacttcacctcgccggccgtgctggccgcgctcggctcgccgctcgccaacaagtacgcc
gagggctatcccggcgcccggcaccacggcggctgcgagatcgtcgacgtcgccgagcgg
atcgccgttgaccgcgccaaggggctgttcggcgccgagcacgccaacgtccaggcgcac
tcgggctcttcggccgtgctggccgcctacgcggccctgctgcgccccggcgacaccgtc
ctcgccctcggcctgccctacggcggccatctcacccacggttcgcccgccaacttctcc
ggccgctggttcgacttcgtcccctacggcgtcgacgcggagaccggtctcctcgaccac
gagcaggttcggacgctggcccgcagccaccggcccaaggccatcgtgtgcgggtccatc
tgctacccccggcacatcgactacgccttcttccgcgaggtcgccgacgaggtgggcgcc
tatctcatcgccgacgccgcccatcccatcggcctggtcgccgggggagcggcgcccagc
cccctgccgtacgcggacatcgtgtgcgccaccacccacaaggtgctgcgcgggccgcgc
ggcgggatgatcctgtgcggcgccgagctcgccgaacgggtcgaccgggccgtgttcccc
ttcacccagggcggtgcgcagatgcacaccatcgccgcgaaggccgtcgcgttcggcgag
gcggcaacaccggcgttcaccgcgtacgcccatcaggtggtcgccaacgcccgggtgctc
gccgccggtctcgccgccgaggggctcgtcgtcaccaccggcggcaccgacacccatctg
atcaccgccgaccccgcgccgctcggcgtcgacggccgcaccggccgcggactgctcgcc
gccgccggaatcgtcctggactgctgtgctcttccccacggtgactcccgcggcctgcgc
ctgggcaccgccgcgctgaccacccagggcatgggggagcaggagatggcccaggtcagc
gcgctgatcgcgggggtgctgcggggcgaggcggaagcggtcagggcacgtgaagaagta
cgggatcttgccgggggatttccgccgtatcccggctga

KEGG   Streptomyces cinnabarinus: STRCI_005638
Entry
STRCI_005638      CDS       T08957                                 
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
scir  Streptomyces cinnabarinus
Pathway
scir00260  Glycine, serine and threonine metabolism
scir00460  Cyanoamino acid metabolism
scir00630  Glyoxylate and dicarboxylate metabolism
scir00670  One carbon pool by folate
scir00680  Methane metabolism
scir01100  Metabolic pathways
scir01110  Biosynthesis of secondary metabolites
scir01120  Microbial metabolism in diverse environments
scir01200  Carbon metabolism
scir01230  Biosynthesis of amino acids
scir01240  Biosynthesis of cofactors
scir04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:scir00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    STRCI_005638
  09102 Energy metabolism
   00680 Methane metabolism
    STRCI_005638
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    STRCI_005638
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    STRCI_005638
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    STRCI_005638
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    STRCI_005638
Enzymes [BR:scir01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     STRCI_005638
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase Cys_Met_Meta_PP Aminotran_5 SelA Lactamase_B_3 Abhydrolase_9 DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: WAZ24236
LinkDB
Position
complement(6188943..6190205)
AA seq 420 aa
MSVLNTPLHELDPEVAAAVDAELHRQQSTLEMIASENFAPVAVMEAQGTVLTNKYAEGYP
GRRYYGGCEYVDVTEQLAIDRVKELFGAEYANVQPHSGASANQAALFALAKPGDTILGLD
LAHGGHLTHGMRLNFSGKQFDVVAYHVDDSGLVDMAEVERLAKEHRPKVIIAGWSAYPRQ
LDFAEFRRIADEVEAYLWVDMAHFAGLVAAGLHPNPVPHADVVTSTTHKTLGGPRGGIIL
AKKDFAKKLNSSVFPGFQGGPLEHVIAAKAVSFKVAASEEFKERQRRTVEGARILAERLT
AADAREAGVNVLSGGTDVHLILVDLRESELDGQQAEDRLHEVGITVNRNAVPNDPRPPMV
TSGLRIGTPALATRGFTAEDFAEVADVIAQALKPSYDADALKARVTALADKHPLYPGLSK
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgtccgtcctgaacacgcccctgcacgagctcgacccggaggtcgccgcggcggtcgac
gccgagctgcaccgccagcagtcgaccctggagatgatcgcgtcggagaacttcgctccg
gtcgccgtcatggaggcccagggcacggtcctcaccaacaagtacgccgagggctacccc
gggcgccgctactacggcggctgcgagtacgtcgacgtcaccgagcagctcgcgatcgac
cgggtcaaggagctgttcggcgccgagtacgccaacgtccagccccactccggtgcctcc
gccaaccaggccgcgctgttcgcgctggccaagcccggcgacaccatcctcggtctggac
ctggcccacggcggccatctgacccacgggatgcggctgaacttctccggcaagcagttc
gacgtggtcgcctaccacgtggacgactccggtctggtcgacatggccgaggtggagcgc
ctggccaaggagcaccgcccgaaggtgatcatcgccggctggtcggcgtacccgcggcag
ctggacttcgcggagttccgccggatcgccgacgaggtcgaggcgtacctgtgggtcgac
atggcgcacttcgccggtctggtcgcggcggggctgcacccgaacccggtgccgcacgcc
gacgtcgtcacctccaccacccacaagaccctcggtggcccgcgcggcggcatcatcctc
gcgaagaaggacttcgcgaagaagctgaactcctccgtcttccccggcttccagggcggc
cccctggagcatgtgatcgcggcgaaggcggtctccttcaaggtcgccgcatcggaggag
ttcaaggagcgccagcggcgtacggtggagggtgcgcgcatcctcgccgagcggctgacg
gcggccgacgcccgcgaggccggagtgaacgtcctgtccggtggcacggacgtccacctc
atcctcgtcgacctgcgcgagtccgagctggacggccagcaggccgaggaccgcctccac
gaggtcggcatcacggtcaaccgcaacgccgtcccgaacgacccgcgtccgccgatggtg
acctccggtctgcgcatcggcacgcccgccctggccacccgcggcttcaccgccgaggac
ttcgccgaggtcgcggacgtgatcgcacaggcgctgaagccgtcctacgacgcggacgcg
ctgaaggcccgggtcacggcgcttgccgacaagcacccgctgtaccccggtttgagcaag
tag

KEGG   Streptomyces cinnabarinus: STRCI_008017
Entry
STRCI_008017      CDS       T08957                                 
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
scir  Streptomyces cinnabarinus
Pathway
scir00260  Glycine, serine and threonine metabolism
scir00460  Cyanoamino acid metabolism
scir00630  Glyoxylate and dicarboxylate metabolism
scir00670  One carbon pool by folate
scir00680  Methane metabolism
scir01100  Metabolic pathways
scir01110  Biosynthesis of secondary metabolites
scir01120  Microbial metabolism in diverse environments
scir01200  Carbon metabolism
scir01230  Biosynthesis of amino acids
scir01240  Biosynthesis of cofactors
scir04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:scir00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    STRCI_008017
  09102 Energy metabolism
   00680 Methane metabolism
    STRCI_008017
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    STRCI_008017
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    STRCI_008017
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    STRCI_008017
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    STRCI_008017
Enzymes [BR:scir01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     STRCI_008017
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase Cys_Met_Meta_PP Aminotran_5 Met_gamma_lyase SelA
Other DBs
NCBI-ProteinID: WAZ26440
LinkDB
Position
complement(8884808..8886109)
AA seq 433 aa
MATTPSTTTASSLSRPLGDLDPDVAAAVHAELRRQQSTLEMIASENFAPAAVLEAQGSVL
TNKYAEGYPGRRYYGGCEHVDVVEQLAIDRVKELFGAEAANVQPHSGAQANAAAMFALLK
PGDTILGLDLAHGGHLTHGMRINYSGKLYNVVPYHVRESDLRVDMDEVEQLALAHRPKMI
VAGWSAYPRRLDFAAFRRIADAVGAYLMVDMAHFAGLVAAGLHPSPVPYADVVTTTTHKT
LGGPRGGVILSRADLAKKINSAVFPGQQGGPLQHVIAAKAVAFKVAAGEEFKDRQRRTLK
GAKILAGRLLADDVAEAGITVLTGGTEVHLILVDLRGSALDGQQAEDRLHRIGITVNRNA
VPFDPRPPMVSSGLRIGTPALATRGFGDAEFREVADIVAEALKGERPDDELRARVERLAA
DFPLYPHLNGAPA
NT seq 1302 nt   +upstreamnt  +downstreamnt
atggcaaccaccccgtcgaccacgaccgcctcctccctgtcccgcccgctcggcgacctc
gacccggacgtcgccgccgcggtccacgccgaactgcgccgtcagcagtcgacgctggag
atgatcgcgtcggagaacttcgccccggccgccgtgctggaggcccagggctcggtgctg
accaacaagtacgccgagggctaccccggccgccgctactacggcggctgcgaacacgtc
gacgtcgtcgagcagttggcgattgaccgggtgaaggagttgttcggcgccgaggccgcg
aacgtgcagccgcactcgggcgcccaggccaacgcggccgcgatgttcgcgctgctgaag
cccggcgacacgatcctcggcctcgacctggcgcacggcggtcacctgacccacggcatg
cgcatcaactactccggcaagctgtacaacgtcgtgccctaccacgtgcgcgagtccgac
ctgcgggtcgacatggacgaggtcgagcaactcgccctggcccaccggcccaagatgatc
gtcgcgggctggtcggcgtatccgcgccggctggacttcgccgcgttccggcggatcgcc
gacgcggtgggcgcgtatctgatggtggacatggcgcacttcgcggggctcgtcgccgcg
gggctgcacccgagcccggtgccctacgccgatgtcgtcacgacgaccacgcacaagacc
ctcggtggcccgcgcggtggtgtgatcctcagccgtgccgacctggccaagaagatcaac
tccgctgtcttcccgggccagcagggcggaccgcttcagcatgtgatcgcggcgaaggcg
gtggccttcaaggtggccgcgggcgaggagttcaaggaccgtcagcggcgcacgctcaag
ggcgcgaagatcctcgccgggcggctgctggccgatgatgtcgcggaggccgggatcacg
gtcctgaccgggggtacggaggtccatctgatcctcgtcgacctgcgcgggtccgccctc
gacgggcagcaggccgaggaccgcctgcaccgcatcggcatcaccgtcaaccgcaacgcg
gtgcccttcgacccacgcccgccgatggtctcctcgggcctgcggatcggcacccccgct
ctggccacccgtggcttcggcgacgcggagttccgcgaggtcgccgacatcgtcgccgag
gccctcaagggcgaacgccccgacgacgagctgcgcgcccgggtcgagaggctcgccgcc
gacttccccctctaccctcacctgaacggagcgccggcatga

DBGET integrated database retrieval system