Streptomyces cinnabarinus: STRCI_005025
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Entry
STRCI_005025 CDS
T08957
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
scir
Streptomyces cinnabarinus
Pathway
scir00020
Citrate cycle (TCA cycle)
scir00190
Oxidative phosphorylation
scir00650
Butanoate metabolism
scir00720
Other carbon fixation pathways
scir01100
Metabolic pathways
scir01110
Biosynthesis of secondary metabolites
scir01120
Microbial metabolism in diverse environments
scir01200
Carbon metabolism
Module
scir_M00009
Citrate cycle (TCA cycle, Krebs cycle)
scir_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
scir_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
scir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
STRCI_005025 (sdhA)
00650 Butanoate metabolism
STRCI_005025 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
STRCI_005025 (sdhA)
00720 Other carbon fixation pathways
STRCI_005025 (sdhA)
Enzymes [BR:
scir01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
STRCI_005025 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Thi4
DAO
Pyr_redox_2
Motif
Other DBs
NCBI-ProteinID:
WAZ23666
LinkDB
All DBs
Position
complement(5514325..5516079)
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AA seq
584 aa
AA seq
DB search
MKIHKYDTVIVGAGGAGMRAAIESTKRSRTAVLTKLYPTRSHTGAAQGGMAAALANVEED
NWEWHTFDTVKGGDYLVDQDAAEILAKEAIDSVLDLEKMGLPFNRTPDGTIDQRRFGGHS
RNHGEAPVRRSCYAADRTGHMILQTLYQNCVKEGVEFFNEFYVLDQLITEVDGVRKSAGV
VAYELATGEIHVFQAKAVIYASGGCGKFFKVTSNAHTLTGDGQAAVYRRGLPLEDMEFFQ
FHPTGIWRMGILLTEGARGEGGILRNKDGERFMEKYAPVMKDLASRDVVSRSIYTEIREG
RGCGPEGDHVYLDLTHLPPEQLDAKLPDITEFARTYLGIEPYTDPIPIQPTAHYAMGGIP
TNVEGEVLADNTTVVPGLYAAGEVACVSVHGANRLGTNSLLDINVFGRRAGIAAAEYSQK
AEFVELPEDPARLVIDQVEDLRTATGTERVATLRKELQETMDANVMVFRTEQTIKTAVEK
IAELRERYRNVSIQDKGKRFNTDLLEAIELGNLLDLAEVMATSALARKESRGGHYREDYP
NRDDVNFMRHTMAYREVGDDGTESIRLDYKPVVQTRYQPMERKY
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaagatccacaagtacgacaccgtcatcgtcggcgccggtggcgcgggcatgcgcgcg
gccatcgagtccaccaagcgcagccgcaccgccgtgctgacgaagctctaccccacccgc
tcccacacgggcgccgcgcagggcggcatggccgccgcgctggccaacgtggaggaggac
aactgggagtggcacaccttcgacacggtcaagggcggtgactacctggtcgaccaggac
gccgcggagatcctggcgaaggaggccatcgactcggtcctcgacctggagaagatgggc
ctgccgttcaaccgcaccccggacggcaccatcgaccagcgccgcttcggcggtcacagc
cgcaaccacggcgaggccccggtccgccggtcctgctacgccgcggaccgcaccggccac
atgatcctccagacgctgtaccagaactgcgtcaaggagggcgtggagttcttcaacgag
ttctacgtcctggaccagctgatcaccgaggtcgacggcgtcaggaagtccgccggtgtg
gtggcgtacgagctggccaccggcgagatccacgtcttccaggcgaaggccgtgatctac
gcgtccggcggctgcggcaagttcttcaaggtgacgtcgaacgcgcacaccctgaccggt
gacggccaggccgccgtctaccgccggggtctgccgctggaggacatggagttcttccag
ttccacccgaccggcatctggcggatgggcatcctgctgacggagggcgcccgcggtgag
ggcggcatcctgcgcaacaaggacggcgagcgcttcatggagaagtacgcgccggtcatg
aaggacctcgcctcccgtgacgtcgtctcgcgctccatctacacggagatccgcgagggc
cgcggctgcggtcccgagggtgaccatgtctacctggacctgacccacctcccgccggag
cagctggacgccaagctgcccgacatcaccgagttcgcgcggacctacctcggcatcgag
ccgtacacggacccgatcccgatccagcccaccgcgcactacgcgatgggcggcatcccg
acgaacgtcgagggtgaggtgctcgccgacaacacgaccgtggttccgggtctgtacgcc
gccggtgaggtcgcctgcgtgtcggtgcacggcgccaaccggctcggcaccaacagcctc
ctggacatcaacgtgttcggccgccgcgcgggtatcgccgccgccgagtactcccagaag
gccgagttcgtcgagctgccggaggacccggcgcggctggtgatcgaccaggtggaggac
ctgcgcaccgccaccggcaccgagcgggtggccacgctccgcaaggagcttcaggagacc
atggacgccaacgtcatggtgttccgcacggagcagacgatcaagacggcggtcgagaag
atcgcggagctgcgcgagcgctaccggaacgtctcgatccaggacaagggcaagcggttc
aacacggacctgctggaggccatcgagctgggcaacctgctggacctggccgaggtcatg
gcgacctccgcgctggcccgcaaggagtcccgcggcggtcactaccgcgaggactacccc
aaccgcgacgacgtcaacttcatgcgccacaccatggcgtaccgcgaggtgggcgacgac
ggcaccgagtccatccgtctcgattacaagccggtcgtccagacccgctaccagccgatg
gagcgtaagtactga
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