Streptomyces cinnabarinus: STRCI_005287
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Entry
STRCI_005287 CDS
T08957
Name
(GenBank) fumarate reductase/succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
scir
Streptomyces cinnabarinus
Pathway
scir00020
Citrate cycle (TCA cycle)
scir00190
Oxidative phosphorylation
scir00650
Butanoate metabolism
scir00720
Other carbon fixation pathways
scir01100
Metabolic pathways
scir01110
Biosynthesis of secondary metabolites
scir01120
Microbial metabolism in diverse environments
scir01200
Carbon metabolism
Module
scir_M00009
Citrate cycle (TCA cycle, Krebs cycle)
scir_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
scir_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
scir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
STRCI_005287
00650 Butanoate metabolism
STRCI_005287
09102 Energy metabolism
00190 Oxidative phosphorylation
STRCI_005287
00720 Other carbon fixation pathways
STRCI_005287
Enzymes [BR:
scir01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
STRCI_005287
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
Pyr_redox_2
FAD_oxidored
GIDA
Thi4
FAD_binding_3
NAD_binding_8
Pyr_redox_3
NAD_binding_7
Lycopene_cycl
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
WAZ23915
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Position
complement(5806539..5808467)
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AA seq
642 aa
AA seq
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MSVVDRQEWDVVVVGAGGAGLRAAIEARERGARTAVICKSLFGKAHTVMAEGGIAAAMAN
ANEHDNWQVHFRDTMRGGKFLNQWRMAELHAQEAPDRVWELETWGALFDRTKDGRISQRN
FGGHEYPRLAHVGDRTGLELIRTLQQKIVSLQQQDFKETGDYESRLKVFQECTVTRVLKD
GPHVSGVFAYDRETGRFFVLEAPAVVIATGGIGKSFKVTSNSWEYTGDGHALALLAGAPL
LNMEFVQFHPTGMVWPPSVKGILVTESVRGDGGVLRNSEGKRFMFDYVPDVFKEKYAESE
EEGDRWYADPDNNRRPPELLPRDEVARAINSEVKAGRGSPHGGVFLDVSTRMPAEVIKRR
LPSMYHQFKELADVDITAEAMEVGPTCHYVMGGIAVDSDTAAARGVPGLFAAGEVAGGMH
GSNRLGGNSLSDLLVFGRRAGRHAAEYTAALAFERPGVDDVQIDTAAAEALRPFSAESPD
EAAPENPYSLHQELQQTMNDLVGIIRREGEMAHALEKLGELRVRARRAGVEGHRQFNPGW
HLALDLRNMLLVSECVARAALERTESRGGHTREDHPTMERVWRNINLLCRLADPTGGLAA
TDPERGQIDLTRETTDPIRPDLLALFDKEELVKYLAEEELYE
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggtggaccggcaggagtgggatgtcgtcgtggtcggcgcgggcggcgcgggc
ctgcgcgccgccatcgaggcacgcgagcgcggcgcccgtacggcggtgatctgcaagtcg
ctgttcggcaaggcgcacacggtgatggccgagggcgggatcgcggccgcgatggccaac
gccaacgagcacgacaactggcaggtccacttccgcgacaccatgcgcggcgggaagttc
ctcaaccagtggcggatggccgagctgcacgcccaggaggccccggaccgggtgtgggaa
ctggagacctggggcgccctgttcgaccgtacgaaggacggccggatctcgcagcgcaac
ttcggcggccacgagtacccgaggctggcccatgtcggcgaccgcaccggcctggaactg
atccgcaccctccagcagaagatcgtctccttgcagcagcaggacttcaaggagaccggc
gactacgagtcccgcctgaaggtcttccaggagtgcacggtcacccgggtgctcaaggac
ggccctcacgtctcgggggtcttcgcctacgaccgggagaccggccgcttcttcgtcctc
gaagcgcccgccgtcgtcatcgccaccggtggcatcggcaagtccttcaaggtgacgtcg
aactcgtgggagtacaccggcgacggccacgcgctggcgctgctcgcgggcgcgccgctg
ctcaacatggagttcgtgcagttccacccgaccggcatggtctggccgccgtcggtgaag
ggcatcctggtcaccgagtcggtgcgcggcgacggcggggtgctcagaaactccgagggc
aaacggttcatgttcgactacgtcccggacgtcttcaaggagaagtacgccgagtccgag
gaggagggggaccgctggtacgcggacccggacaacaaccggcgtccccctgagctgctc
ccccgcgacgaggtggcccgcgccatcaactccgaggtgaaggcgggccggggctcgccg
cacggcggggtcttcctggacgtgtcgacgcggatgcccgccgaggtgatcaagcgccga
ctgccgtcgatgtaccaccagttcaaggagctggcggacgtcgacatcaccgcggaggcg
atggaggtcgggccgacctgtcactacgtgatgggcgggatcgccgtcgattccgacacc
gccgccgcgcgcggggtgccggggctgttcgcggccggtgaggtcgcgggcgggatgcac
ggctcgaaccggctcggcggcaactccctgtccgatctgctggtgttcgggcgccgggcg
ggccggcacgcggccgagtacaccgccgccctcgccttcgagcggcccggggtcgacgac
gtccagatcgacaccgccgcggccgaggcgctgcgcccgttctccgcggaaagccccgac
gaggccgcgccggagaacccgtacagcctccaccaggaactccagcagaccatgaacgac
ctggtgggcatcatccgccgcgagggcgagatggcgcacgcgctggagaaactgggcgag
ctgcgggtacgggcccgccgggccggggtcgaggggcaccggcagttcaaccccggctgg
catctggccctggacctcaggaacatgctgctggtcagcgagtgcgtggcacgggccgcc
ctggagcgcaccgagtcgcgcggcggccacacccgcgaggaccatccgacgatggagcgc
gtctggcgcaacatcaatctgctgtgccggctggccgaccccacgggcggtctcgcggcg
accgatcccgagcgcggccagatcgacctcacccgggagaccaccgaccccatccgcccg
gacctgctcgccctcttcgacaaggaggagctggtcaagtacctcgccgaagaggagctg
tacgagtga
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