Streptomyces cinnabarinus: STRCI_005437
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Entry
STRCI_005437 CDS
T08957
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
scir
Streptomyces cinnabarinus
Brite
KEGG Orthology (KO) [BR:
scir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scir03021
]
STRCI_005437
Transcription machinery [BR:
scir03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
STRCI_005437
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
DUF7343
HTH_24
MarR_2
Sigma70_ECF
MarR
NirdL-like_HTH
IF2_N
HTH_3
HTH_Crp_2
HTH_AraC
GerE
Motif
Other DBs
NCBI-ProteinID:
WAZ24052
LinkDB
All DBs
Position
complement(5978836..5979942)
Genome browser
AA seq
368 aa
AA seq
DB search
MRDGDGPVRDEERGTRELPAENSDDAVAPGGSRHLADGVDGIPDQARPHPEDDAATARAA
APDSAVQDPPHRRRIGGTPGRAETRARQRATGGTMSEHQRDDDQAVPATQHEAPDREPQD
RSGARAMFVELRELKDGSPEYAELRNQLVRMHLPLVEHLARRFRNRGEPLDDLTQVATIG
LIKSVDRFDPDRGVEFSTYATPTVVGEIKRHFRDKGWAVRVPRRLQELRLALTTATAELS
QQHGRSPTVHELAEKLAISEEEVLEGLESANAYSTLSLDVPDTDDESPAVADTLGAEDEA
LEGVEYRESLKPLLEDLPPREKRILLLRFFGNMTQSQIAQEVGISQMHVSRLLARTLAQL
REKLLVEE
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
gtgagggacggggacgggccggtgcgggacgaagagcgcggcacacgggagctgccggcc
gagaactccgacgacgcagtcgctccgggcggttcccgacacctggcggacggcgttgac
ggcattcccgaccaggccaggccgcatcccgaggacgacgcggccaccgcgcgggcggct
gcgccggacagcgccgtgcaggacccgcctcaccggaggcggatcgggggcacccccggc
cgggctgagactagagctcgacagagggcgacgggcgggacgatgagcgagcaccagcga
gacgacgaccaggccgtgccggccacgcagcacgaggcaccggaccgtgagccgcaggac
cgcagcggggcgcgcgccatgttcgtcgagctgcgcgagctgaaggacggcagcccggag
tacgcggagctgcgcaaccagctggtccggatgcatctgccgctcgtcgagcacctcgcc
cgccgcttccgcaaccgcggcgagccgctggacgacctcacccaggtcgccaccatcggc
ctgatcaagtcggtcgaccgcttcgacccggatcgcggggtggagttctccacgtacgcg
accccgacggtcgtcggtgagatcaagcggcacttccgcgacaagggctgggcggtgcgc
gtcccgcgccggctccaggagctgcggctcgcgctgaccacggccacggcggagctgtcc
cagcagcacggccgctcccccacggtccacgagctcgccgagaagctggccatctcggag
gaggaggtgctggagggcctggagtccgccaacgcctattccacgctctccctggacgtc
cccgacaccgacgacgagtcgccggccgtggcggacaccctgggcgcggaggacgaggcg
ctggagggtgtcgagtaccgcgagtccctcaagccgctgctggaggatctgccgccgcgc
gagaagcgcatcctgctgctgcggttcttcggcaacatgacacagtcgcagatcgcccag
gaggtcggcatctcgcagatgcacgtgtcgcgcctactggcccgcacactggcccagctg
cgggagaagctgctggtcgaggagtag
DBGET
integrated database retrieval system
