Streptomyces cinnabarinus: STRCI_005512
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Entry
STRCI_005512 CDS
T08957
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
scir
Streptomyces cinnabarinus
Pathway
scir00300
Lysine biosynthesis
scir00470
D-Amino acid metabolism
scir01100
Metabolic pathways
scir01110
Biosynthesis of secondary metabolites
scir01120
Microbial metabolism in diverse environments
scir01230
Biosynthesis of amino acids
Module
scir_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
scir00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
STRCI_005512 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
STRCI_005512 (lysA)
Enzymes [BR:
scir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
STRCI_005512 (lysA)
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Ortholog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WAZ24119
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All DBs
Position
6048389..6049780
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AA seq
463 aa
AA seq
DB search
MSRSAHPAGPRHADVLPEGHYSAPPADLNALDAKVWAQTVSRDQDGVVTVGGIDVNRLAE
EYGTPAYVIDEADFRSRARAWRTAFGTDADVFYAGKAFLSRAVVRWLHEEGLNLDVCSGG
ELATALSAGMPADRIAFHGNNKSPEEIERAIRAGVGRIVLDSFQEIVRVAHIARELGKRQ
RVQIRITVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRALQLDSLELIGIHSHIGS
QIFDMSGFEVAAHRVVGLLKDIRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAKALN
EIVTRECEAARLRTPRISVEPGRAIVGPTAFTLYEVGTIKPLDGLRTYVSVDGGMSDNIR
TALYDAEYSVTLVSRTSDAGPMLARVVGKHCESGDIVVRDAFLPADLAPGDLIAVPATGA
YCRSMASNYNHVLRPPVVAVHDGEARVIVRRETEEDLLRLDVG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagccgttccgcacaccccgccgggccccgccacgccgatgttctgcccgagggccac
tactccgccccgccggcggacctgaacgccctcgacgcgaaggtgtgggcccagaccgtc
agccgtgaccaggacggtgtcgtcaccgtcggcggcatcgacgtgaaccggctcgccgag
gagtacggcacccccgcctatgtcatcgacgaggccgacttccgctcccgcgcccgcgcc
tggcgcaccgccttcggcaccgacgccgatgtcttctatgcgggcaaggccttcctctcc
cgcgccgtcgtgcggtggctgcacgaggaggggctcaacctcgacgtgtgctccggcggt
gagctcgccaccgccctgtccgccgggatgcccgccgaccgcatcgccttccacggcaac
aacaagtcgccggaggagatcgagagggccatccgcgccggtgtcgggcggatcgtcctc
gactccttccaggagatcgtccgcgtcgcccacatcgcgcgcgagctcggcaagcggcag
cgcgtgcagatccgtatcaccgtcggcgtcgaggcccatacgcacgagttcatcgccacc
gcccacgaggaccagaagttcggcattccgctggccggggggcaggccgcggaggccgtg
cggcgggcgcttcagctcgacagcctcgaactgatcggcatccactcacacatcggctcg
cagatcttcgacatgagcgggttcgaggtcgccgcccaccgggtggtcgggctgctcaag
gacatccgggacgagcacggggtggagctgcccgagatcgacctcgggggcggcctcggt
atcgcttacaccagtgacgacgatccccgtgagccccatgagatcgccaaggcgctcaac
gagatcgtcacccgtgagtgcgaggccgcccggctgcgcaccccgcggatctccgtcgag
ccggggcgcgccatcgtcgggccgaccgccttcaccctctacgaggtcggcaccatcaag
cccctcgacgggctgcgcacctacgtctccgtcgacggcggcatgtccgacaacatccgc
accgcgctctatgacgccgagtacagcgtcaccctcgtctcccgcacctccgacgccggg
ccgatgctcgcccgggtcgtcggcaagcactgcgagagcggggacatcgtggtgcgggac
gcgttcctgcccgcggacctggcaccgggtgacctgatcgccgtaccggcgaccggcgcc
tactgccggtcgatggccagcaactacaaccatgtgctccggccgcccgtcgtcgccgtg
cacgacggcgaggcccgggtgatcgtccgccgggagacggaggaggacctcctgcgtctc
gacgtcggctga
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