KEGG   Streptomyces cinnabarinus: STRCI_005742
Entry
STRCI_005742      CDS       T08957                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
scir  Streptomyces cinnabarinus
Brite
KEGG Orthology (KO) [BR:scir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:scir03032]
    STRCI_005742
   03036 Chromosome and associated proteins [BR:scir03036]
    STRCI_005742
   03400 DNA repair and recombination proteins [BR:scir03400]
    STRCI_005742
DNA replication proteins [BR:scir03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    STRCI_005742
Chromosome and associated proteins [BR:scir03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    STRCI_005742
DNA repair and recombination proteins [BR:scir03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      STRCI_005742
SSDB
Motif
Pfam: Bac_DNA_binding HC2 Mitofilin
Other DBs
NCBI-ProteinID: WAZ24332
LinkDB
Position
6302027..6302665
AA seq 212 aa
MNKAQLVEAIADKMGGRQQAADAVDHVLDAIVRAVVSGERVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPRGGEVSVKKAPKGSLTGGASATVKK
AAAKKATAKKATTAKKTAAKKTTAAAKKTTAKKTTAKKTTAAAKQTTAKKATTAKKATAK
KAPAKKATAKKAPAKKSTARKTTAKKTTARKR
NT seq 639 nt   +upstreamnt  +downstreamnt
gtgaacaaggcgcagctcgtagaagcgattgccgacaagatgggcggccgtcagcaggcc
gccgatgctgtcgaccacgtactggacgcgatcgtccgcgcggtcgtctcgggtgagcgg
gtctccgtcaccggcttcggatcgttcgagaaggtcgaccgccccgcccggtacgcccgt
aacccccagacgggcgagcgggttcgggtcaagaagacctccgttccgcgcttccgtgcg
ggtcagggcttcaaggacctggtgagcggctcgaagaagctcccgcgcggcggcgaggtc
tccgtgaagaaggcgcccaagggcagcctgaccggcggcgcttccgcgacggtcaagaag
gccgcggcgaagaaggccaccgcgaagaaggccacgaccgccaagaagacggcggccaag
aagaccacggcggccgcgaagaagaccacggcgaagaagacgaccgcgaagaagaccacg
gcggccgcgaagcagaccaccgcgaagaaggccacgaccgccaagaaggcgacggccaag
aaggcgcccgcgaagaaggcgaccgccaagaaggccccggccaagaagtcgacggcccgc
aagaccaccgccaagaagaccaccgcccgcaagaggtag

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