Streptomyces cinnabarinus: STRCI_005742
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Entry
STRCI_005742 CDS
T08957
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
scir
Streptomyces cinnabarinus
Brite
KEGG Orthology (KO) [BR:
scir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scir03032
]
STRCI_005742
03036 Chromosome and associated proteins [BR:
scir03036
]
STRCI_005742
03400 DNA repair and recombination proteins [BR:
scir03400
]
STRCI_005742
DNA replication proteins [BR:
scir03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
STRCI_005742
Chromosome and associated proteins [BR:
scir03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
STRCI_005742
DNA repair and recombination proteins [BR:
scir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
STRCI_005742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
Mitofilin
Motif
Other DBs
NCBI-ProteinID:
WAZ24332
LinkDB
All DBs
Position
6302027..6302665
Genome browser
AA seq
212 aa
AA seq
DB search
MNKAQLVEAIADKMGGRQQAADAVDHVLDAIVRAVVSGERVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPRGGEVSVKKAPKGSLTGGASATVKK
AAAKKATAKKATTAKKTAAKKTTAAAKKTTAKKTTAKKTTAAAKQTTAKKATTAKKATAK
KAPAKKATAKKAPAKKSTARKTTAKKTTARKR
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcgcagctcgtagaagcgattgccgacaagatgggcggccgtcagcaggcc
gccgatgctgtcgaccacgtactggacgcgatcgtccgcgcggtcgtctcgggtgagcgg
gtctccgtcaccggcttcggatcgttcgagaaggtcgaccgccccgcccggtacgcccgt
aacccccagacgggcgagcgggttcgggtcaagaagacctccgttccgcgcttccgtgcg
ggtcagggcttcaaggacctggtgagcggctcgaagaagctcccgcgcggcggcgaggtc
tccgtgaagaaggcgcccaagggcagcctgaccggcggcgcttccgcgacggtcaagaag
gccgcggcgaagaaggccaccgcgaagaaggccacgaccgccaagaagacggcggccaag
aagaccacggcggccgcgaagaagaccacggcgaagaagacgaccgcgaagaagaccacg
gcggccgcgaagcagaccaccgcgaagaaggccacgaccgccaagaaggcgacggccaag
aaggcgcccgcgaagaaggcgaccgccaagaaggccccggccaagaagtcgacggcccgc
aagaccaccgccaagaagaccaccgcccgcaagaggtag
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