Streptomyces cinnabarinus: STRCI_005841
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Entry
STRCI_005841 CDS
T08957
Symbol
whiG
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
scir
Streptomyces cinnabarinus
Pathway
scir02020
Two-component system
scir02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
scir00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
STRCI_005841 (whiG)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
STRCI_005841 (whiG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scir03021
]
STRCI_005841 (whiG)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
scir02035
]
STRCI_005841 (whiG)
Transcription machinery [BR:
scir03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
STRCI_005841 (whiG)
Bacterial motility proteins [BR:
scir02035
]
Flagellar system
Flagellar assembly proteins
Stator
STRCI_005841 (whiG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_31
HTH_23
UPF0122
Motif
Other DBs
NCBI-ProteinID:
WAZ24424
UniProt:
A0ABY7KNE4
LinkDB
All DBs
Position
6403726..6404568
Genome browser
AA seq
280 aa
AA seq
DB search
MPQHTSGSDRAAIPPAARDGGNVRPPAPSTLDELWRSYKATGGERLREQLILHYSPLVKY
VAGRVSVGLPPNVEQADFVSSGVFGLIDAIEKFDIDREIKFETYAITRIRGAMIDELRAL
DWIPRSVRQKARNVERAYATLEARLRRTPSEGEVAAEMGIAVDELHSVFSQLSLANVVAL
EELLHVGGEGGDGLSVMDTLEDTAADNPVEVAEDRELRRFLARAINTLPEREKTVVTLYY
YEGLTLAEIGNVLGVTESRVSQIHTKSVLQLRAKLASFGR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcacacctccgggtccgaccgggcggcgatccccccagccgcccgcgacggt
ggcaacgtgcggccgcccgctccctcgacgctcgacgagctgtggcggtcgtacaaggcg
acggggggcgaacggctgcgcgagcagctgatcctgcactactcgccgctcgtgaaatac
gtggcggggcgggtcagcgtcgggctgccgcccaatgtggagcaggccgacttcgtgtcc
tcgggagtgttcgggctgatcgacgcgatcgagaagttcgacatcgaccgggagatcaag
ttcgagacgtacgcgatcacccggatccggggcgccatgatcgacgagctgagggcgctg
gactggattccgcgttcggtacggcagaaggcgcgcaacgtggagcgggcctacgccacg
ctggaggcgcggctgcgcagaacgccgtccgagggggaggtggccgccgagatggggatc
gcggtggacgaactccactcggtcttcagtcagttgtcgctggccaacgtggtggcgctg
gaggagctgctgcatgtggggggtgagggcggcgacggtctgagcgtcatggacacgctg
gaggacaccgccgcggacaaccccgtggaggtggccgaggaccgggagctgcggcggttt
ctggcgcgggcgatcaacacgctcccggagcgggagaagaccgtggtgacgctctactac
tacgaggggctcacgctggccgagatcgggaacgtgctgggggtgaccgagagccgggtg
agccagatccacaccaagtcggtgcttcagttgcgggcgaagctggcgagtttcggccga
tga
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