Streptomyces cinnabarinus: STRCI_005921
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Entry
STRCI_005921 CDS
T08957
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
scir
Streptomyces cinnabarinus
Pathway
scir03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STRCI_005921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scir03019
]
STRCI_005921
03016 Transfer RNA biogenesis [BR:
scir03016
]
STRCI_005921
Enzymes [BR:
scir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
STRCI_005921
Messenger RNA biogenesis [BR:
scir03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
STRCI_005921
Transfer RNA biogenesis [BR:
scir03016
]
Prokaryotic type
tRNA degradation factors
STRCI_005921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
DUF2017
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
WAZ24496
LinkDB
All DBs
Position
6501383..6503602
Genome browser
AA seq
739 aa
AA seq
DB search
MENETHYAEAVIDNGAFGTRTIRFETGRLAKQAAGSAVAYLDDDTMVLSATTASKNPKDQ
LDFFPLTVDVEERMYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQV
VATIMALNPDHLYDVVAINAASASTQLAGLPFSGPIGGVRVALINGQWVAFPTHSELEDA
VFDMVVAGRTLEDGDVAIMMVEAEATDKTIKLVEGGAEAPTEEVVAAGLEAAKPFIKVLC
KAQADLAAKAAKPTGEFPIFLDYQDDVLEALTAAVKPELASALTIAGKQERESELDRVKA
LAAEKLLPEFEGREKEISAAYRSLTKTLVRERVIKEKKRIDGRGVTDIRTLAAEVEAIPR
VHGSAVFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSTGETGRVGSP
KRREIGHGALAERALVPVLPTREEFPYAIRQVSEALSSNGSTSMGSVCASTMSLLNAGVP
LKAPVAGIAMGLISQEIEGETHYVTLTDILGAEDAFGDMDFKVAGTKEFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMMEAIDTPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGAEITIEDDGTIYIGASDGPAAEAARTTINSIANPTMPEVGERYLGTVVK
TTTFGAFVSLLPGKDGLLHISQIRKLAGGKRVENVEDVLGVGAKVQVEIAEIDSRGKLSL
IPVIEGEESADDKKDDTDK
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaggccgtcatcgacaatggcgccttcggcacccgc
accatccgcttcgagacgggccgcctggccaagcaggccgccggttccgccgtggcgtac
ctggacgacgacaccatggtgctgtcggccaccaccgcctccaagaaccccaaggaccag
ctcgacttcttcccgctgacggtggacgtcgaggagcggatgtacgccgccggcaagatc
cccggcagcttcttccgccgtgagggtcggccgagcgaggacgcgatcctcacctgccgc
ctcatcgaccgcccgctgcgcccgtccttcaagaagggcctgcgcaacgagatccaggtc
gtcgccacgatcatggcgctcaacccggaccacctgtacgacgtcgtggcgatcaacgcc
gcctcggcctccacccagctggccggtctgcccttctccggcccgatcggcggcgtccgc
gtcgcgctgatcaacggccagtgggtggccttcccgacgcactccgagctcgaggacgcc
gtcttcgacatggtggtcgcgggccgcaccctggaggacggcgacgtcgcgatcatgatg
gtcgaggccgaggccaccgacaagaccatcaagctggtcgagggcggcgccgaggcgccg
accgaggaggtcgtcgccgccggtctggaagccgcgaagcccttcatcaaggtgctctgc
aaggcccaggccgacctcgccgcgaaggccgccaagccgaccggcgagttcccgatcttc
ctcgactaccaggacgacgtcctggaggcgctgaccgccgccgtcaagccggagctcgcc
tccgcgctgacgatcgcgggcaagcaggagcgcgagtcggagctggaccgcgtcaaggcg
ctcgccgccgagaagctcctgccggagttcgagggccgcgagaaggagatctccgccgcg
taccgctcgctgaccaagaccctggtccgtgagcgcgtcatcaaggagaagaagcgcatc
gacggccgtggcgtgacggacatccgtacgctcgccgccgaggtcgaggccatcccgcgc
gtgcacggctccgcggtgttcgagcgtggcgagacccagatcctgggcgtcaccaccctc
aacatgctccgtatggagcagcagctcgacacgctgtcgccggtgacgcgcaagcgctac
atgcacaactacaacttcccgccgtactccaccggcgagaccggccgcgtcggctccccg
aagcgccgcgagatcggccacggcgctctcgccgagcgcgccctggtcccggtcctgccg
acgcgcgaggagttcccctacgcgatccgccaggtctccgaggcgctgagctccaacggc
tcgacgtccatgggctcggtctgcgcctccaccatgtcgctgctgaacgccggtgtgccg
ctgaaggcccccgtcgccggtatcgccatgggcctgatctcccaggagatcgagggcgag
acgcactacgtcaccctcaccgacatcctcggtgcggaggacgccttcggtgacatggac
ttcaaggtcgccggcaccaaggagttcgtgaccgccctccagctcgacaccaagctcgac
ggcatccccgcctcggtcctggccgccgcgctgaagcaggcccgtgacgcccgcctccac
atcctcgacgtgatgatggaagcgatcgacacgccggacgagatgtccccgaacgccccg
cggatcatcaccgtgaagatccccgtggacaagatcggtgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacaccggcgccgagatcacgatcgaggacgacggc
accatctacatcggggcctccgacggcccggccgccgaggccgcccgcaccacgatcaac
tcgatcgccaacccgaccatgccggaggtcggcgagcgctacctgggcacggtcgtgaag
acgaccaccttcggtgcgttcgtctccctgctcccgggcaaggacggtctgctgcacatc
tcgcagatccgtaagctcgccggcggcaagcgcgtggagaacgtcgaagacgtgctcggc
gtgggcgccaaggtccaggtcgagatcgccgagatcgactcccgcggcaagctctccctg
atccccgtgatcgagggcgaggagtcggccgacgacaagaaggacgacaccgacaagtga
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