Streptomyces cinnabarinus: STRCI_005937
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Entry
STRCI_005937 CDS
T08957
Name
(GenBank) HAMP domain-containing protein
Organism
scir
Streptomyces cinnabarinus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
HisKA
GAF_2
GAF
DUF4795
OmpH
OKR_DC_1_N
RNase_Y_N
ATG14
Motif
Other DBs
NCBI-ProteinID:
WAZ24507
UniProt:
A0ABY7KM72
LinkDB
All DBs
Position
6521780..6527233
Genome browser
AA seq
1817 aa
AA seq
DB search
MESGAATRGTKTRAKGGQSLMNQRKPRGGTTAVDTASLNRLLAALVSMRDGNFRKRLTVS
GDGVMSEIAAVFNEVADRNLHLTGELSRVRRMVGREGKLTERLETGACEGSWAAAIDASN
ALVDDLVRPVSEVGRVLSAVAEGDLSPRMELRTQAPDGTGHPLRGEFLKVGRTVNNLVDQ
LSTFTDEVTRVASEVGTEGKLGGQARVRGMSGSWKDLTDSVNTMAYRLTAQVRDIALVTT
AVAKGDLSRKVTVHVAGEMLELKNTVNTMVDQLSSFSSEVTRVAREVGTEGELGGQAQVP
GVAGVWKDLTDSVNLMAGNLTAQVRGISQVTTAVANGDLSQKVTVSARGEVAQLADTINQ
MTETLRIFADEVTRVANEVGAEGQLGGQANVPGAAGTWKDLTDSVNTVFRNLTIQVRDIA
AVTTAVANGDLSQKVTVDVAGEMLELKNTVNGMVDQLSSFGSEVTRVAREVGVEGELGGQ
AQVPGAAGTWKDLTDSVNTAFRNLTGQVRNIAQVTTAVANGDLSQKVTVDVSGEMLQLKN
TVNTMVDQLSAFADQVTRMARDVGTEGRLGGQAVVPGVSGTWKELTDSVNFMGGNLTSQV
RQIAQVTTAVARGDLSQKIDVDARGEILELKNTINTMVDQLSGFAEQVTRVAREVGTEGR
LGGQAQVPGVAGVWRDLTDSVNGMAGNLTAQVRGISQVATAVARGDLSQKITVDARGEIL
ELKNTLNTMVDQLSSFAEEVTRVAREVGTEGQLGGQAEVQGVSGTWKDLTQSVNFMANNL
TIQVRNIAEVTTAVAKGDLSKKITVDAKGEILELVTTVNTMVDQLSSFAEQVTRVAREVG
TEGILGGQAHVPGVVGIWKDLSDNVNLMAKNLTMQVRNISQVAAAVANGDLTRTVTIEAR
GEVAQLADTFNTMVKTLSSFADQVTKVAREVGTDGILGGQARVPGVAGTWKDLTESVNQM
ASNLTGQVRNIAMVTTAIAKGDLTKKIDIDARGEILELKTTINTMVDQLSSFAEEVTRVA
REVGTEGQLGGQARVRDVDGTWRDLTESVNEMAGNLTRQVRAIARVATAVTRGDLNLKID
VDASGEIQELQDYINKMIANLRDTTIANKEQDWLKGNLARISALMQGRRDLQDVASLIMS
ELTPVVSAQHGAFFLAMPDASHGAEDQYELRMLGSYGYSMGSMPTSFRPGEALVGTAAQE
KRTILVENAPSGYLKISSGLGEAPPAQVIVLPVLFEGKVLGVIELASFTPFNQIQKDFLN
QIAEMIATSVNTISVNTKTEVLLKQSQELTEQLQERSAELENRQKALQASNAELEEKAEL
LAQQNRDIEVKNTEIEEARQVLEERAEQLAVSMRYKSEFLANMSHELRTPLNSLLILAKL
LADNADANLTPKQVEFAETIHGAGSDLLQLINDILDLSKVEAGKMDVSPTRIALVQLVDY
VEATFRPLTAEKGLDLSVRVSPELPATLHTDEQRLLQVLRNLLSNAVKFTDSGSVELVIR
PAGTDVPMAIREQLLETGSLRDPDAGLIAFSVTDTGIGIAASKMRVIFEAFKQADGTTSR
KYGGTGLGLSISREIAQLLGGEIQAQSEPGRGSTFTLYLPLHPSELPPQGYHPQAMPSLE
AGDLVSSAAELSGAEIETPAEVKSYQETQNGAAALFRRRRRKTVGELEQRPFQQEWPTVE
LEAAPQVRRGIRFGGEKVLIVDDDIRNVFALTSVLEQHGLSVLYAENGREGIEVLEQHDD
VAVVLMDIMMPEMDGYATTTAIRRMPQFAGLPIIALTAKAMKGDREKAIESGASDYVTKP
VDPDHLLSVMQQWMREE
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
gtggagtctggcgcagcgacgcggggcacgaagacgcgcgcgaaaggcggacagtccctg
atgaaccagcgcaagccgcgtggcgggaccaccgcggtggacacggcttccctgaaccgg
ctgctggcggccctcgtctcgatgcgggacgggaacttccgcaagcggctgacggtctcc
ggcgacggcgtgatgtccgagatcgcggccgtgttcaacgaggtggccgaccggaatctg
catctgaccggtgagctgtcccgggtgcggcgcatggtgggccgcgagggcaagctcacg
gaacggctggaaacaggcgcctgtgagggctcctgggcggccgcgatcgacgcctccaac
gccctggtggacgatctcgtacggcccgtgtccgaggtcggccgggtgctctccgcggtc
gcggagggtgatctgtcgccgcgcatggagctgcggacgcaggccccggacggcaccggg
catccgctgcgcggggagttcctgaaggtcggccgtaccgtcaacaatctggtcgaccag
ctgtccacgttcaccgacgaggtcacccgggtggccagtgaggtgggcaccgagggcaag
ctgggcggtcaggcacgcgtgcgtggcatgtcgggttcgtggaaggacctcacggactcc
gtcaacacgatggcgtaccggctgaccgcgcaggtccgcgacatcgcgctggtgaccacc
gcggtcgccaagggcgatctgtcgcggaaggtcacggttcatgtggccggcgagatgctg
gagctgaagaacaccgtcaacacgatggtggaccagctgtcgtcgttctcctccgaggtg
acccgggtcgcgcgcgaggtgggcaccgagggcgagctcggcgggcaggcgcaggtgccg
ggtgtggcgggcgtgtggaaggacctcaccgattcggtgaacctcatggccggcaacctc
accgcccaggtgcgcgggatctcccaggtgaccaccgcggtcgccaacggtgatctgtcg
cagaaggtgaccgtgtcggcgcgcggtgaggtcgcgcagctcgcggacaccatcaaccag
atgaccgagacgctgcggatcttcgccgacgaggtcacgcgcgtggccaacgaggtcggc
gccgaggggcagctgggtggccaggccaatgtgccgggtgcggcggggacgtggaaggac
ctgacggactccgtcaacacggtcttccggaacctgacgatccaggtgcgggacatcgcc
gcggtgacgacggccgtggccaacggtgacctctcgcagaaggtcaccgtggatgtggcc
ggcgagatgctggagctgaagaacaccgtcaacggcatggtcgaccagctgtcgtccttc
ggttccgaggtcacgcgcgtggcgcgcgaggtcggtgtcgagggtgagctgggcgggcag
gcgcaggtaccgggggcggcggggacgtggaaggacctgacggactccgtcaacaccgcg
ttccgcaacctcaccgggcaggtccgcaacatcgcgcaggtgacgacggccgtggccaac
ggtgacctgtcgcagaaggtcaccgtggacgtctccggcgagatgctccagctgaagaac
accgtgaacacgatggtggaccagctctcggccttcgccgaccaggtgacgcggatggcc
cgggacgtgggcacggaggggcgcctgggcggtcaggcggtcgtaccgggggtgtccggc
acctggaaggagctgaccgactccgtcaacttcatgggtggcaacctcacctcgcaggtg
cggcagatcgcccaggtgaccaccgcggtggcgcgcggcgatctctcccagaagatcgac
gtcgacgcgcggggcgagatcctggagctgaagaacaccatcaacacgatggtcgaccag
ctctccggcttcgccgagcaggtgacccgggtggcccgtgaggtgggcaccgaggggcgg
ctcggcgggcaggcgcaggtgcccggtgtggccggtgtgtggcgggacctgaccgactcc
gtgaacggcatggccggcaacctcaccgcgcaggtgcgcgggatctcgcaggtcgccacc
gcggtggcccggggcgacctgtcccagaagatcaccgtggacgcgcgcggggagatcctg
gagctgaagaacaccctgaacacgatggtcgaccagctgtcctccttcgcggaggaggtc
accagggtggcccgtgaggtgggtacggagggacagctcggcgggcaggccgaggtgcag
ggggtctccggcacctggaaggacctcacgcagtccgtgaacttcatggcgaacaacctg
accattcaggtgcgcaacatcgccgaggtcaccaccgcagtcgccaagggcgacctgtcg
aagaagatcaccgtcgacgccaagggcgagatcctcgaactcgtcaccaccgtcaacacg
atggtggaccaactgtcctcgttcgccgaacaggtgacccgggtggcccgtgaggtgggc
accgagggcatcctgggcggccaggcgcatgttcccggtgtggtcggcatctggaaggac
ctcagcgacaacgtcaacctgatggccaagaacctgaccatgcaggtgcggaacatctcc
caggtcgcggcggccgtcgccaacggtgacctgacccggacggtgacgatcgaggcgcgc
ggcgaggtcgcgcagctcgcggacaccttcaacaccatggtgaagacgctgagttcgttc
gccgaccaggtcaccaaggtggcccgtgaggtgggcacggacggcatcctgggcggccag
gcgcgggtgcccggtgtggccggtacctggaaggacctcaccgagtcggtgaaccagatg
gcgtccaacctgaccggtcaagtgcgcaacatcgccatggtcaccaccgccatcgccaag
ggcgatctgaccaagaagatcgacatcgacgcgcggggcgagatcctggagctgaagacg
accatcaacacgatggtcgaccagctctcgtccttcgccgaggaggtcacccgcgtcgcc
cgcgaggtgggcaccgagggacagctcggcggccaggctcgcgtgcgtgacgtggacggc
acctggcgggacctgaccgagtcggtgaacgagatggccgggaacctgacccggcaggtg
cgtgccatcgcgcgcgtggcgaccgcggtgacccgcggtgacctgaacctgaagatcgac
gtcgacgcgtccggcgagatccaggaactccaggactacatcaacaagatgatcgccaac
ctgcgtgacaccacgatcgccaacaaggaacaggactggctcaagggcaacctcgcccgg
atctccgcgctgatgcagggccgccgggacctccaggacgtggcctcgctgatcatgagc
gagctgactccggtggtctccgcgcagcacggcgcgttcttcctggcgatgcccgatgcc
agccatggcgccgaggaccagtacgagctgcggatgctgggcagttacggctactcgatg
ggctccatgccgacctcgttccggccgggcgaggcgctggtcgggacggcggcgcaggag
aagcgcacgatcctggtggagaacgcgcccagcggctacctgaagatctcctccgggctc
ggcgaggcgccgcccgcgcaggtgatcgtgttgccggtgctgttcgagggcaaggtgctc
ggcgtgatcgaactggcctccttcacgccgttcaaccagatccagaaggacttcctgaac
cagatcgcggagatgatcgcgaccagcgtcaacaccatctcggtcaacaccaagaccgag
gtgctgctgaagcagtcgcaggagctgaccgagcaactccaggagcggtcggccgagttg
gagaaccggcagaaggcactccaggcgtccaacgccgaactggaggagaaggccgagctg
ctggcccagcagaaccgtgacatcgaggtgaagaacaccgagatcgaggaggcgcggcag
gtcctggaggagcgcgccgagcagctcgcggtgtcgatgcggtacaagagcgagttcctg
gccaacatgtcgcacgaactgcgcacaccgctcaactcgctgctgatcctggccaagttg
ctcgccgacaacgccgacgccaacctcactccgaagcaggtcgagttcgccgagaccatc
cacggcgccggttccgatctgctccagctgatcaacgacatcctcgacctgtccaaggtc
gaggcgggcaagatggacgtctccccgacccggatcgcgctcgtccagctcgtcgactac
gtcgaggcgaccttccgcccgctgaccgcggagaagggcctggacctgtccgtacgggtc
tcgccggaactgccggccaccctgcacaccgacgagcagcggctgctccaggttttgcgc
aacctactgtccaacgcggtgaagttcaccgactccggctcggtcgagctggtcatccgg
ccggccgggacggacgtgccgatggcgatccgggagcagctgctggagaccggttcgctg
cgggacccggacgccggactgatcgccttctcggtgacggacaccggcatcggcatcgcc
gccagcaagatgcgggtgatcttcgaggcgttcaagcaggccgacggcacgaccagccgc
aagtacggcggtacgggcctgggcctgtcgatctcccgggagatcgcccagctgctgggc
ggcgagatccaggcccagagcgaaccggggcgtggctcgaccttcacgctgtacctgccg
ctgcacccgagcgagctgccgccgcagggctatcacccgcaggccatgccgtccctggag
gccggtgacctggtgtcgtccgccgcggagctgtcgggcgcggagatcgagacaccggcc
gaggtgaagtcgtaccaggagacgcagaacggtgccgccgcgctcttccggcgccgtcgc
cgcaagaccgtcggcgagctggagcagcggccgtttcagcaggagtggccgaccgtggag
ctggaggcggcgccgcaggtgcgccggggcatccggttcggtggcgagaaggtgctgatc
gtcgacgacgacatccgcaacgtcttcgcgctcaccagcgtgctggaacagcacggcctt
tcggtgctgtacgccgagaacggccgtgagggcatcgaggtgctggagcagcacgacgat
gtggcggtcgtgctgatggacatcatgatgcccgagatggacgggtacgcgacgaccacg
gcgatccgccggatgccgcagttcgccgggctgccgatcatcgcgctgaccgccaaggcc
atgaagggcgaccgggagaaggcgatcgagtcgggcgcctccgactacgtcaccaagccg
gtcgaccccgatcacctgctgtcggtgatgcagcagtggatgcgggaggagtga
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