Streptomyces cinnabarinus: STRCI_005941
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Entry
STRCI_005941 CDS
T08957
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
scir
Streptomyces cinnabarinus
Brite
KEGG Orthology (KO) [BR:
scir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scir03009
]
STRCI_005941 (rimO)
Enzymes [BR:
scir01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
STRCI_005941 (rimO)
Ribosome biogenesis [BR:
scir03009
]
Prokaryotic type
ribosomal protein modification factors
STRCI_005941 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
WAZ24511
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Position
6532258..6533727
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AA seq
489 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLEADGWDLVEDASDADVAVVNTCGFVDAAKKDS
VDALLEANDLKGHGRTQAVVAVGCMAERYGKELADALPEADGVLGFDDYADISDRLSTIL
SGGVHASHTPRDRRKLLPISPAERQESAAEVALPGHAPADLPEGLAPASGPRAPMRRRLD
GAPVASVKLASGCDRRCTFCAIPSFRGSFISRRPSDVLNETRWLAEQGVKEIMLVSENNT
SYGKDLGDIRLLESLLPELADVDGIERVRVSYLQPAEMRPGLIDVLTGTPKIAPYFDLSF
QHSAPAVLRAMRRFGDTDRFLELLDTIRSKAPQAGVRSNFIVGFPGESEADLAELERFLN
HARLDAIGVFGYSDEEGTEAATYEDKLDPDLVADRLARVSRLAEQLVSQRAEERLGETVQ
VLVESVDEEGVYGRGAHQAPETDGQVLLTSGEGLSVGRIVEAKVVGTEGVDLVAEPLHGS
LVSGEEGAR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacgccgtaccgtcgcactcgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcttggaggcggacggctgggacctcgtggaggacgcctcc
gacgcggacgtcgccgtcgtcaacacctgtggcttcgtcgacgccgccaagaaggactcc
gtcgacgccctcctggaggccaatgacctcaaggggcacggcagaacccaggccgtcgtg
gcggtgggctgcatggccgagcgctacggcaaggagctggcggacgcgctgccggaggcc
gacggcgtgctcggcttcgacgactacgcggacatctccgaccgcctctcgaccatcctg
agcggcggcgtccacgcctcgcacaccccgcgcgaccggcgcaagctgctgccgatcagc
ccggccgagcggcaggagtccgccgccgaggtcgcgctgcccgggcacgccccggccgac
ctcccggagggcctcgcgcccgcctccggcccccgcgcgccgatgcgccggcggctcgac
ggcgcgcccgtcgcctcggtgaagctcgcctccggctgcgaccggcgctgcaccttctgc
gccatcccctccttccgcggctccttcatctcgcgccgccccagcgacgtgctgaacgag
acgcgttggctggccgagcagggcgtcaaggagatcatgctggtctccgagaacaacacc
tcctacggcaaggacctcggcgacatccgcctgctggagtcgctgctgcccgagctggcc
gacgtcgacggcatcgagcgggtgcgcgtcagctacctccagccggccgagatgcgcccc
gggctgatcgacgtcctcaccggcacgcccaagatcgcgccctacttcgacctctccttc
cagcactccgcgcccgccgtgctccgcgcgatgcgccgcttcggcgacaccgaccgcttc
ctggagctgctcgacaccatccggagcaaggccccccaggccggtgtgcgctccaacttc
atcgtgggcttccccggcgagtccgaggcggacctggccgagctggagcgtttcctcaac
cacgcgcgcctggacgccatcggcgtcttcggctactccgacgaggagggcaccgaagcg
gcgacctacgaggacaagctcgacccggacctcgtcgccgaccggctcgcccgggtctcc
cggctggccgagcagctcgtctcgcagcgggccgaggagcgtctgggcgagaccgtccag
gtgctggtcgagtccgtcgacgaggagggcgtgtacggccgcggcgcgcaccaggcgccg
gagacggacggccaggtgctgctcacgagcggcgagggcctgagcgtcggccgtatcgtc
gaggcgaaggtggtcggcaccgagggtgtcgacctcgtggccgagccgctccacggctcg
ctcgtatccggtgaggagggggccagatga
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