Streptomyces cinnabarinus: STRCI_005980
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Entry
STRCI_005980 CDS
T08957
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
scir
Streptomyces cinnabarinus
Pathway
scir00300
Lysine biosynthesis
scir00470
D-Amino acid metabolism
scir01100
Metabolic pathways
scir01110
Biosynthesis of secondary metabolites
scir01120
Microbial metabolism in diverse environments
scir01230
Biosynthesis of amino acids
Module
scir_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
scir00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
STRCI_005980 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
STRCI_005980 (dapF)
Enzymes [BR:
scir01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
STRCI_005980 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
WAZ24546
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Position
6569370..6570239
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AA seq
289 aa
AA seq
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MSTRIAFLKGHGTENDFVIVPDPENAIDLPPSAVAALCDRRAGIGGDGLLHVVRSAAHPE
AKDLAAEAEWFMDYRNGDGSIAEMCGNGVRVFARYLQRAGHITEGDLAIATRGGVKRVHL
AKNGDVTVGMGKARLPEGDVTVSVGERSWPARNVNMGNPHAVAFVEDLAHAGSLHEAPPF
SPASAYPDGVNVEFVVDRGPRHVALRVHERGAGETRSCGTGACAVAVATARRDGADPAVT
GTPATYTVDVPGGTLVITELPDGEIEMTGPAVIVAEGELDATWLTTLAR
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcggatcgccttcctcaagggtcacggcaccgagaacgacttcgtgatcgtc
ccggaccccgagaacgccatcgacctgcccccgtccgccgtcgccgcgctgtgcgaccgg
cgcgcgggcatcggcggggacggcctgctgcacgtcgtgcggtccgccgcgcaccccgag
gcgaaggacctggcggccgaggcggagtggttcatggactaccgcaacggcgacggttcg
atcgcggagatgtgcggcaacggcgtccgcgtcttcgcccgctacctccagcgcgccgga
cacatcaccgagggagacctcgcgatcgccacgcgcgggggcgtcaagcgcgtgcacctc
gccaagaacggtgacgtcacggtcggcatgggcaaggcgcgcctgcccgagggggacgtc
acggtgagcgtcggcgagcgcagctggcccgcgcggaacgtgaacatgggcaacccgcac
gcggtggcgttcgtggaggacctcgcgcacgccgggagcctgcacgaggcgccgccgttc
agcccggcctcggcctacccggacggtgtgaacgtggagttcgtcgtcgaccgcggaccc
cggcacgtcgcgctgcgcgtgcacgagcgcggcgccggagagacccggtcctgcggcacg
ggcgcgtgtgccgtcgccgtcgccacggcccgccgcgacggcgccgacccggcggtcacc
ggcaccccggcgacgtacaccgtcgacgtgcccggcggcaccctggtgatcaccgagctc
cccgacggcgagatcgagatgaccggccccgcggtgatcgtcgccgagggtgaactcgac
gcgacctggctgacgacgctcgcacgctga
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