Streptomyces cinnabarinus: STRCI_006414
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Entry
STRCI_006414 CDS
T08957
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
scir
Streptomyces cinnabarinus
Pathway
scir03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
STRCI_006414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scir03000
]
STRCI_006414
03400 DNA repair and recombination proteins [BR:
scir03400
]
STRCI_006414
Enzymes [BR:
scir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
STRCI_006414
Transcription factors [BR:
scir03000
]
Prokaryotic type
Helix-turn-helix
AraC family
STRCI_006414
DNA repair and recombination proteins [BR:
scir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
STRCI_006414
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
Treh_trans_TtfA
DUF6233
Motif
Other DBs
NCBI-ProteinID:
WAZ27243
UniProt:
A0ABY7KUP4
LinkDB
All DBs
Position
7076245..7077633
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AA seq
462 aa
AA seq
DB search
MDEDTRYEAVRSRDARFDGEFFFAVETTGIYCRPSCPAVTPKRRNVRFFTTAAAAQGSGF
RACRRCRPDAAPGSAAWNVRADVVGRAMRLIGDGVVDREGVAGLAGRLGYSPRQVQRQLT
GELGAGPVALARAQRAHTARVLLQTTGLPITEIAFAAGFASVRQFNDTIRTVYARTPSEL
RRAATGASRRPAAPTAGIPLRLAHRGPYRSGAVFDLLQAEAVPGVEDVSGIPGRRTYRRT
LRLPHGTGIVAVDELPGSTRTDTGTHPGGWLDAHLHLTDPRDLTTAVQRLRRLFDLDADP
YAVDERLGADPRLAPLVAARPGLRSPGAADPEELAVRALVGPAGAERLVRAYGKALDSPC
GSLTHLFPEPAVLAEAEPHGTLGALTAALADGAVRLDAGADRDDTEAALLALPGLDPRTV
AVVRTRALGDPDVAPPGMDIPDNWRPWRSYAVQHLRVAGELE
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggacaccaggtacgaggcggtgcgcagccgggacgcccggttcgacggcgag
ttcttcttcgccgtcgagaccaccggcatctactgccgcccgagctgccccgccgtcacc
cccaagcgccgtaacgtccgcttcttcacgaccgccgccgccgcgcagggctcgggattc
cgggcctgccggcggtgccgcccggacgccgcgcccggctcggccgcgtggaacgtccgc
gcggacgtcgtgggccgggccatgcggctgatcggcgacggggttgtggaccgggagggc
gtggccgggctcgccggacggctcggctacagcccccgccaggtgcagcggcagctgacc
ggcgagctgggcgccggacccgtcgcgctggcccgtgcccagcgggcccacaccgcgcgc
gtcctgctccagaccaccggcctgccgatcaccgagatcgcgttcgccgccggattcgcc
agcgtcaggcagttcaacgacaccatccggaccgtctacgcccgcacccccagcgaactg
cgccgcgccgccaccggggcctcccgccggcccgccgccccgaccgccggtatcccgctg
aggctcgcccaccgcggcccctaccgctccggcgccgtcttcgacctgctccaggccgaa
gcggtacccggcgtggaggacgtcagcggcatcccgggccgccgcacctaccgccgcacc
ctgcgcctgccgcacggcaccggcatcgtcgccgtcgacgagctgcccggcagcaccagg
accgacaccggcacccaccccggcggctggctcgacgcccacctccacctcaccgacccc
cgcgacctcaccaccgccgtccagcgcctgcgccgcctgttcgacctggacgccgacccc
tacgccgtggacgagcggctcggcgccgacccccggctcgccccgctggtcgccgcccgc
cccggactccgctcacccggcgccgccgaccccgaggaactcgccgtacgggcgctggtc
gggcccgccggtgccgagcggctggtgcgggcctacgggaaggcgctggactcgccctgc
ggcagcctcacccacctcttcccggaaccggccgtcctcgccgaggccgagccgcacggc
accctgggcgcgctcaccgccgccctcgccgacggcgccgtacgcctggacgcgggcgcc
gaccgggacgacaccgaggcggcgctgctcgcgctgcccggcctcgacccccgtaccgtc
gccgtcgtgcgcacccgcgccctcggcgacccggatgtcgccccgcccggcatggacatc
cccgacaactggcgcccctggcgctcttacgccgtacaacacctgcgcgtggcaggggag
ttggagtga
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