Streptomyces cinnabarinus: STRCI_006638
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Entry
STRCI_006638 CDS
T08957
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
scir
Streptomyces cinnabarinus
Brite
KEGG Orthology (KO) [BR:
scir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scir03021
]
STRCI_006638
Transcription machinery [BR:
scir03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
STRCI_006638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
DUF7343
HTH_23
MarR_2
HTH_24
HTH_28
HTH_Crp_2
HTH_3
GerE
MarR
DUF134
YdaS_toxin
DUF7437
Motif
Other DBs
NCBI-ProteinID:
WAZ25163
LinkDB
All DBs
Position
7336415..7337206
Genome browser
AA seq
263 aa
AA seq
DB search
MPTRVSAKHHPHDDAPDTAQAFRELAELPAGPRRDTLREEIVEAWLPMADRLAGRFRSRG
ESFEDLRQVAALGLVKAVDRYDPERGNAFESYAVPTITGEIKRHFRDHMWTLHVPRRVQD
LRNRVRFAVQELQTVSGHRPTVAEIAAHADMTEADVKIGLEALESFTALSLDAELPGSED
GYSLSDALGSVDPALDTVVDRESVKPRIAALPERERAILYMRFFGDMTQSRIAEELGISQ
MHVSRLISRCCGRVREQVLRDVA
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcccacacgagtgagcgcgaagcaccacccgcacgacgacgcccccgacaccgcgcag
gcgttccgcgaactcgccgaactgcccgccgggccacggcgcgacacgctccgcgaggag
atagtcgaggcctggctgcccatggcggaccggctcgcgggccggttccgcagccgcggc
gagtccttcgaggacctccgccaggtggccgccctcggcctggtcaaggccgtggaccgg
tacgaccccgagcggggcaacgccttcgagagctacgccgtgccgaccatcaccggcgag
atcaagcggcatttccgggaccacatgtggaccctgcatgtgccgcgccgggtgcaggat
ctgcgtaatcgcgtgcggttcgccgtgcaggaactccagaccgtctccgggcaccggccc
acggtcgcggagatcgccgcgcacgccgacatgaccgaggccgacgtcaagatcggtctg
gaggcgctggagagtttcaccgcgctgtccctggacgcggagctgcccggcagtgaggac
gggtactccctgagcgacgcgctgggttccgtggatccggcgctggacacggtcgtggac
cgggagtccgtgaagccgcggatcgccgcgctgccggagcgggagcgggcgatcctgtac
atgcgtttcttcggggacatgacgcagagccggatcgccgaggaactggggatctcgcag
atgcatgtgtcccggctgatcagccggtgctgcgggcgggtccgggagcaggtcctgcgg
gacgtcgcgtag
DBGET
integrated database retrieval system
