Streptomyces citrinus: V2W30_10610
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Entry
V2W30_10610 CDS
T11106
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
scit Streptomyces citrinus
Pathway
scit03030
DNA replication
scit03430
Mismatch repair
scit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V2W30_10610 (dnaE)
03430 Mismatch repair
V2W30_10610 (dnaE)
03440 Homologous recombination
V2W30_10610 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scit03032
]
V2W30_10610 (dnaE)
03400 DNA repair and recombination proteins [BR:
scit03400
]
V2W30_10610 (dnaE)
Enzymes [BR:
scit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V2W30_10610 (dnaE)
DNA replication proteins [BR:
scit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
V2W30_10610 (dnaE)
DNA repair and recombination proteins [BR:
scit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
V2W30_10610 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
WWQ63742
LinkDB
All DBs
Position
complement(2266490..2270029)
Genome browser
AA seq
1179 aa
AA seq
DB search
MSKPPFTHLHVHTQYSLLDGAARLKDMFNACNEMGMTHIAMSDHGNLHGAYDFFHSAQKA
GVTPIIGIEAYVAPESRRNKRKIQWGQPHQKRDDVSGSGGYTHKTIWAANKTGLHNLFKL
SSDAYAEGWLQKWPRMDKETISQWSEGLIASTGCPSGELQTRLRLGQFDEALKAASEYQD
IFGKDRYFLELMDHGIEIERRVRDGLLEIGKKLGIPPLVTNDSHYTYAHEATAHDALLCI
QTGKNLSDPDRFRFDGTGYYLKSTDEMYAVDSSDAWQEGCRNTLLVAEQIDTTGMFEKRD
LMPKFDIPEEGYTNTTWFKEEVRRGMERRYPGGVPEDRQKQAEYEMDIIIQMGFPGYFLV
VADFIMWAKNNGIAVGPGRGSAAGSIVAYAMGITDLDPIEHGLIFERFLNPERVSMPDVD
IDFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAM
PADVLGKGIDLNGITDPKHPRYSEAGEIRAMYENEPDVKKVIDTAKGVEGLVRQMGVHAA
GVIMSSEPIIDHAPIWVRHTDGVTITQWDYPQCESLGLIKMDFLGLRNLTIMDDAVKMVK
SNKGIDLEMLSLPLDDPKTFELLCRGDTLGVFQFDGGPMRSLLRQMQPDNFEDISAVSAL
YRPGPMGMNSHTNYAERKNGRQEITPIHPELEEPLKETLGLTYGLIVYQEQVQKAAQIVA
GYSLGEADILRRVMGKKKPEELAKNFTIFQEGARKNGFSDQAIQALWDVLVPFAGYAFNK
AHSSAYGLVTYWTAYLKANYPAEYMAALLTSVKDDKDKSAVYLNECRRMKIKVLPPNVNE
SVHNFAAQGDDVILFGLEAVRNVGTNVVDAIIRSRKAKGKYASFPDYLDKVEAAACNKRT
TESLIKAGAFDELGHTRKGLTAQYEPMIDNVVAVKRKEAEGQFDLFGGGEEESDAPGFGL
DVEFSTDEWDKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGIGQLTGGDFGDGAVV
TVGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDAVVFVKGRL
DKREDVPRLVAMEMQVPDLSNAGTNAPVILTIPALKVTPPMISRLGEILSHHRGDSEVRI
KLQGPRKTTVLRLDRHRVKPDPALFGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaagccgcccttcacgcacctgcacgtccacacccagtactcgctgctggacggt
gccgcgcggctgaaggacatgttcaacgcgtgcaatgagatgggcatgacccatatcgcg
atgtccgaccacggcaacctccacggggcgtacgacttcttccactccgcgcagaaggcc
ggtgtgacgccgatcatcggcatcgaggcgtacgtcgccccggagtcccggcgcaacaag
cggaagatccagtggggccagccgcaccagaagcgcgacgacgtgtccggttcgggtggt
tacacgcacaagacgatctgggcggcgaacaagacgggcctgcacaacctcttcaagctg
tcctcggacgcgtacgccgagggctggctccagaagtggccgcgcatggacaaggagacg
atctcgcagtggagcgagggcctgatcgcctccaccggctgcccctccggcgagctccag
acgcggctgcgcctcggccagttcgacgaggccctgaaggcagcctccgagtaccaggac
atcttcggcaaggaccggtacttcctggagctgatggaccacggcatcgagatcgagcgc
cgggtccgtgacgggctcctggagatcggcaagaagctcggcatcccgccgctggtgacc
aacgactcgcactacacgtacgcccacgaggcgaccgcgcacgacgccctgctgtgcatc
cagaccggcaagaacctctccgacccggaccgcttccggttcgacgggacgggctactac
ctgaagtcgaccgacgagatgtacgccgtcgactcctcggacgcctggcaggagggctgc
cgcaacaccctcctggtcgccgagcagatcgacacgaccggcatgttcgagaagcgcgac
ctcatgccgaagttcgacatcccggaggagggctacaccaacaccacctggttcaaggag
gaggtgcggcgcggcatggagcgccgctaccccggcggtgtccccgaggaccggcagaag
caggccgagtacgagatggacatcatcatccagatggggttcccggggtacttcctcgtc
gtcgccgacttcatcatgtgggccaagaacaacggcatcgcggtgggccccgggcgtggt
tccgccgccggttcgatcgtcgcgtacgccatgggcatcaccgacctcgacccgatcgag
cacggactgatcttcgagcggttcctcaaccccgagcgcgtctccatgcccgatgtcgac
atcgacttcgacgagcgcaggcgcgtcgaggtgatcaggtacgtgaccgagaagtacggc
gccgacaaggtcgccatgatcggcacctacggcaagatcaaggccaagaacgcgatcaag
gactccgcgcgcgtgctgggctacccgtacgcgatgggcgaccgcctcaccaaggcgatg
cccgccgacgtcctcggcaagggcatcgacctcaacggcatcaccgaccccaagcacccg
cgctacagcgaggcgggcgagatccgggcgatgtacgagaacgagccggacgtgaagaag
gtcatcgacaccgccaagggcgtcgagggcctggtccggcagatgggcgtgcacgccgcc
ggcgtcatcatgtccagcgagccgatcatcgaccacgccccgatctgggtgcggcacacc
gacggcgtcaccatcacgcagtgggactacccgcagtgcgagtcgctcggcctgatcaag
atggacttcctgggcctcaggaacctgacgatcatggacgacgccgtgaagatggtgaag
tccaacaagggcatcgacctggagatgctctcgctgccgctggacgaccccaagaccttc
gaactgctctgccgcggtgacacgctcggcgtcttccagttcgacggcggcccgatgcgt
tcgctgctgcgtcagatgcagcccgacaacttcgaggacatttccgccgtctcggccctg
taccggccgggcccgatgggcatgaactcgcacacgaactacgccgagcgcaagaacggc
cgccaggagatcacgccgatccacccggagctcgaagagcccctgaaggagacgctgggc
ctcacctacggcctcatcgtgtaccaggagcaggtgcagaaggccgcgcagatcgtcgcc
ggctactcgctcggcgaggccgacatcctgcgccgcgtgatgggcaagaagaagcccgag
gaactggcgaagaacttcaccatcttccaggagggcgcccgcaagaacggcttctccgac
caggcgatccaggccctgtgggacgtcctggtgcccttcgccggctacgcgttcaacaag
gcgcactcctccgcgtacggcctggtcacctactggaccgcgtacctgaaggccaactac
ccggccgagtacatggccgcgctgctcacctcggtgaaggacgataaggacaagtcggcc
gtctacctgaacgagtgccggcgcatgaagatcaaggtcctcccgccgaacgtgaacgag
tcggtgcacaacttcgccgcccagggcgacgacgtgatcctcttcggcctggaggccgtc
cgtaacgtcggtacgaacgtggtggacgcgatcatccgctcccgcaaggccaaggggaag
tacgcctcgttccccgactacctcgacaaggtcgaggccgccgcgtgcaacaagcggacg
accgaatccctcatcaaggcgggcgcgttcgacgagctgggacacacccgcaagggcctc
accgcgcagtacgagccgatgatcgacaacgtggtggcggtcaagaggaaggaagcggaa
gggcagttcgacctcttcggcggcggcgaggaggagagcgacgccccgggcttcgggctc
gacgtcgagttctccaccgacgagtgggacaagacgtatctgctcgcccaggagcgggag
atgctcggcctgtacgtgtccgaccacccgctgttcggtctggagcacgtgctgagcgac
aaggccgacgcggggatcgggcagctgaccggcggcgacttcggggacggtgccgtcgtc
accgtcggcggcatcatctcgggcctccagcgcaagatgaccaagcagggcaacgcctgg
gcgatcgcgaccgtcgaggacctcgccggttccatcgagtgcatgttcttcccggcgacc
taccagctggtgtcgacccaactcgtcgaggacgccgtggtgttcgtcaagggacgcctc
gacaagcgcgaggacgtgccgcgtctggtcgccatggagatgcaggtccccgacctgtcg
aacgcgggcaccaacgcgccggtgatcctcaccatccccgccctgaaggtgaccccgccg
atgatcagccgcctcggcgagatcctcagccaccaccgcggcgacagcgaggtgcggatc
aagctccaggggccgcgcaagaccacggtcctgcggctcgaccggcaccgggtgaagccg
gacccggcgctcttcggcgacctgaaggtgctgctcggcccgtcctgcctggccggctga
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integrated database retrieval system
