Streptomyces citrinus: V2W30_29440
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Entry
V2W30_29440 CDS
T11106
Name
(GenBank) HAMP domain-containing protein
Organism
scit Streptomyces citrinus
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Ortholog
Paralog
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
HisKA
GAF_2
GAF
ATG17_like
ATG14
RNase_Y_N
Motif
Other DBs
NCBI-ProteinID:
WWQ67046
LinkDB
All DBs
Position
6310213..6315711
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AA seq
1832 aa
AA seq
DB search
MESGAATRGKKARAEGGQSLTKQRKSRNGTTNVDTAALNRLLAGLVAMRDGNFRKRLTVN
GDGVMSEIAAVFNEVADRNLHLTGELSRVRRMVGREGKLTERLETGACEGSWAAAINASN
ALVDDLVRPVSEVGRVLTAVAEGDLSPRMELRAQVPEGAGHPLRGEFLKVGRTVNNLVDQ
LSTFADEVTRVASEVGTEGKLGGQARVRGMSGSWKDLTDSVNTMAYRLTAQVRDIALVTT
AVAKGDLSRKVTVHVAGEMLELKNTVNTMVDQLSSFSSEVTRVAREVGTEGELGGQAQVP
GVAGVWKDLTDSVNLMAGNLTAQVRGIAQVTTAVASGDLSQKVTVSARGEVAQLAETINQ
MTETLRTFADEVTRVANEVGAEGQLGGQANVPGAAGTWKDLTDSVNTVFRNLTTQVRDIA
TVTTAVANGDLSQKVTVDVAGEMLELKNTVNTMVDQLSAFGSEVTRVAREIGVEGELGGQ
ALVVGAAGTWKDLTDSVNTAFRNLTGQVRNIAQVTTAVANGDLSQKVTVDVSGEMLQLKN
TVNTMVDQLSSFADQVTRMARDVGTEGRLGGQARVDGVSGTWKELTDSVNFMAGNLTSQV
RQIAQVTTAVARGDLSQKIDVDARGEILELKNTINTMVDQLSAFADQVTRVAREVGTEGR
LGGQAQVPGVAGVWRDLTDSVNGMAGNLTAQVRNIAQVATAVARGDLSQKIDVDARGEIL
ELKNTLNTMVDQLSAFAEQVTRVAREVGTDGILGGQAEVQGVSGTWKDLTQSVNGMANNL
TLQVRNIAEVTTAVARGDLSKKITVDAKGEILELVTTVNTMVDQLSSFAEQVTRVAREVG
TEGQLGGQARVPGVTGIWKELSDNVNLMANNLTSQVRNISQVASAVANGDLTRTVTIEAR
GEVAQLADTFNTMVRTLSSFADQVTKVAREVGTDGILGGQARVPGVSGTWKDLTESVNGM
ASNLTGQVRNIAMVTTAIAKGDLTKKIDIDARGEILELKTTINTMVDQLSSFAEQVTRVA
REVGTEGQLGGQARVRDVDGTWRDLTESVNEMAGNLTRQVRAIAAVATAVTRGDLNLKID
VDAAGEIQVLQDNINKMISNLRDTTIANEEQDWLKGNLARISGLMQGRRDLDDVASLIMS
ELTPVVSAQHGAFFLALPLDDAAEAGIAPEDAYELRMLGSYGYSMGSMPTSFRPGETLIG
TAAQERRTILVDNAPSGYLKIASGLGEAPPAQVIVIPVLFEGTVLGVIELASFTPFTQIQ
KDFLGQIAEMIATSVNTISVNTKTEVLLKQSQELTEQLRERSAELENRQKALQASNAELE
EKAELLAQQNRDIEVKNTEIEEARQVLEERAEQLAVSMRYKSEFLANMSHELRTPLNSLL
ILAKLLADNADANLTPKQVEFAETIHGAGSDLLQLINDILDLSKVEAGKMDVSPTRIALV
QLVDYVEATFRPLTAEKQLDFSVRVSPELPTTLHTDEQRLLQVLRNLLSNAVKFTDSGAV
ELVIRPAGADVPNAIREQLLEAGSLREADGDLIAFSVTDTGIGIAASKMRVIFEAFKQAD
GTTSRKYGGTGLGLSISREIARLLGGEIHAQSEPGRGSTFTLYLPLHPSELPPQGYAQLA
PAIEPGQPLALDAAPERVDVETPAEVKSYQETQNGPAALFRRRRRHLPSIESRAALPGQP
APAQERAEEQWDGAVEQSAPAPRRGFQFGGEKVLIVDDDIRNVFALTSVLEQHGLSVLYA
ENGREGIEVLEQHDDVTVVLMDIMMPEMDGYATTTAIRRMPQFAGLPIIALTAKAMKGDR
EKAIESGASDYVTKPVDPDHLLSVMEQWMRGE
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
gtggagtctggcgcagcgacgcggggcaagaaggcgcgcgcggaaggcggacagtccctg
actaaacagcgcaagtcacgtaatggcacgacaaacgtggacactgcggcgctgaacagg
ctgctcgccggcctcgtcgcgatgcgggacggcaatttccgcaagcggctgacggtcaac
ggcgacggcgtgatgtcggagatcgcggccgtcttcaacgaggtggccgaccggaatctg
cacctgaccggcgagttgtcccgtgtgcggcgcatggtcggcagggagggcaagctcacc
gaacgcctggagacgggcgcctgcgagggctcctgggcggccgccatcaacgcctcgaac
gcgctcgtcgacgatctcgtacgacccgtctccgaggtcggccgggtactcaccgcggtc
gccgagggcgatctgtcgccgcgcatggagctgcgcgcgcaggtgcccgaaggggcggga
catccgctgcggggcgagttcctgaaggtcgggcggaccgtcaacaatctggtcgaccag
ctctccaccttcgccgacgaggtcacgcgcgtggccagcgaagtgggtaccgagggcaag
ctcggcgggcaggcgcgcgtacgcggaatgtccggttcatggaaagatctgacggattcc
gtcaatacgatggcgtaccggctcaccgcgcaggtgcgtgacattgctctcgtcacgacc
gcggtggccaagggtgatctgtcgcggaaggtcacggttcacgtcgcgggcgagatgctc
gagctgaagaacaccgtgaacacgatggtcgaccagctgtcgtcgttctcctccgaggtc
acgcgagtggcccgcgaggtgggtacggaaggcgagctcggcgggcaggcgcaggtgccc
ggagtggccggcgtgtggaaggacctcaccgattcggtgaacctcatggccggcaatctg
acggcgcaggtgcgcgggatcgctcaggtcaccacggccgtggcgagcggcgacctgtcc
cagaaggtcacggtgtcggcgcgcggcgaggtcgcccagctcgcggagacgatcaaccag
atgaccgagacgctgcgtacgttcgcggacgaggtcacacgcgtcgccaacgaggtcggg
gccgaggggcaactgggcgggcaggcgaacgtgccgggtgccgccggtacgtggaaggac
ctgacggactccgtgaacacggtgttccgcaacctcaccacgcaggtgcgggacatcgcg
acggtcacgacggcggtggccaacggtgacctgtcgcagaaggtcaccgtcgatgtcgcc
ggtgaaatgctggagttgaagaacaccgtcaacacgatggtggaccagctctccgccttc
ggctccgaagtcacgcgtgtggcacgggagatcggtgtcgaaggtgagctgggtggccag
gcgctggtggtgggggccgccggtacctggaaggacctcaccgactctgtgaacacggct
ttccgcaatctcaccggtcaggtgcgcaacatcgcgcaggtgacgacggcggtggccaac
ggtgacctgtcgcaaaaggtcaccgtcgacgtctccggcgagatgctccagctgaagaac
accgtgaacacgatggtggaccagctgtcgagcttcgccgatcaggtgacccgtatggcg
cgcgacgtgggcacggagggccgcctcggcggtcaggcccgtgtcgacggtgtgagcggt
acgtggaaggaactcaccgactccgtcaacttcatggcggggaacctgacgtcacaggtg
cgacagatcgcgcaggtcaccacggcggtggcgcgcggtgacctgtcgcagaagatcgac
gtcgacgcgcgcggcgagatcctggagctgaagaacaccatcaacacgatggtcgaccag
ctctccgccttcgccgaccaggtgacccgggtggcccgcgaggtgggcaccgaaggccgg
ctgggcgggcaggctcaggtgcccggcgtcgccggtgtgtggcgcgacctgacggactcc
gtgaacggcatggccggcaacctcacggcccaggtgcgcaacatcgcccaggtcgcgacg
gcggtggcgcgcggtgacctgtcgcagaagatcgatgtggacgcgcgcggcgagatcctg
gagctgaagaacaccctcaacacgatggtggaccagctctcggccttcgcggagcaggtg
acgcgggtcgcccgcgaggtgggtacggacggcatcctcggcggacaagccgaggtgcag
ggtgtgtcgggtacgtggaaggacctgacgcagtccgtgaacggcatggccaacaacctc
acccttcaggtgcgcaacatcgccgaggtcacgacggcggtggcgcgcggcgacctctcc
aagaagatcaccgtcgacgccaagggcgagatcctcgaactcgtcaccaccgtgaacacg
atggtcgaccagctgtcgagcttcgccgagcaggtgacccgggtggcccgtgaagtgggt
accgagggacaactgggcggccaggcgcgggttcccggtgtcaccggcatctggaaggaa
ctcagcgacaacgtcaacctgatggccaacaacctgaccagtcaggtgcgcaacatctcc
caggtggcctcggccgtggccaacggcgacctgacccggaccgtcaccatcgaggcgcgc
ggcgaggtcgcgcagctcgccgacacgttcaacaccatggtgcggacgctgagttcgttc
gccgaccaggtcaccaaggtggcccgcgaggtgggtacggacggcatcctcggcgggcag
gcccgcgtacccggagtgtccggtacgtggaaggacctcaccgagtccgtgaacggcatg
gcgtcgaacctcaccggccaggtgcgcaacatcgcgatggtcacgacggccatcgccaag
ggcgacctgaccaagaagatcgacatcgacgcgcgcggcgagatcctcgaactgaagacg
acgatcaacacgatggtcgaccagctgtcgagcttcgccgagcaggtgacccgggtggcc
cgcgaggtgggcacggaaggacagctgggcggccaggcgcgggtgcgcgacgtggacggc
acgtggcgcgacctgaccgagtccgtgaacgagatggcagggaacctgacccgtcaggtg
cgcgccatcgcggccgtcgccaccgcggtgacccgcggcgacctcaacctcaagatcgac
gtcgacgccgcgggcgagatccaggtccttcaggacaacatcaacaagatgatctccaac
ctgcgcgacaccacgatcgccaacgaggaacaggactggctcaagggcaacctggcccgc
atctcgggtctgatgcagggccgccgcgacctcgacgacgtggcatccctgatcatgagc
gagctgactccggtggtctcggcgcagcacggcgcgttcttcctggcgctgccgctggac
gacgcggccgaggcggggatcgcgcccgaggacgcgtacgagctgcgcatgctcggcagc
tacggctactccatgggctcgatgccgacgtccttcaggcccggtgagacgctcatcggg
accgccgcccaggagaggcgcacgatcctcgtcgacaacgcgcccagcggctacctgaag
atcgcctcgggcctcggggaggcgccgccggcgcaggtcatcgtgatccccgtgctcttc
gagggcacggtgctcggcgtgatcgagctggcgtccttcacgcccttcacacagatccag
aaggacttcctggggcagatcgcggagatgatcgcgacgagcgtcaacacgatctccgtc
aacacgaagaccgaggtgctgctcaagcagtcccaggagttgaccgagcaactccgtgag
cggtcggccgagttggagaaccgccagaaggccctccaggcgtccaacgccgagctggag
gagaaggcggagctgctcgctcagcagaaccgcgacatcgaggtgaagaacaccgagatc
gaagaggcgcggcaggtcctggaggagcgcgccgagcagctcgcggtctccatgcgctac
aagagcgagttcctcgccaacatgtcgcacgaactgcggacgccgctcaactcgcttctg
atcctcgccaagttgctggccgacaacgccgacgcgaacctcacccccaagcaggtcgag
ttcgccgagacgatccatggagcgggctccgacctgctccagctgatcaacgacatcctg
gacctgtcgaaggtcgaggcgggcaagatggacgtctcgccgacgcgcatcgcgctggtg
cagctcgtcgactacgtagaggcgacgttcaggccgctgaccgcggagaagcaactcgac
ttctccgtaagggtgtcgccggaactgcccactaccttgcacaccgacgaacagcgcctc
cttcaggtgctgcgcaacctgctctccaacgcggtgaagttcaccgactccggagccgtg
gagctcgtcatcaggccggccggtgccgacgtaccgaacgcgatccgtgaacagctcctg
gaagcgggctcgttgcgggaggcggacggcgatctcatcgccttctcggtgaccgacacc
gggatcggtatcgcggccagcaagatgcgtgtcatcttcgaggcgttcaagcaggccgac
ggaacgaccagccgcaagtacggcggcaccggcctcggtctgtccatcagccgtgagatc
gcccgcctgttgggcggcgagatccacgcccagagcgagccggggcgcggctcgacgttc
accctctacctgccgctgcacccgagcgagctgccgccgcagggctacgcgcaactcgcc
ccggccatcgaaccgggccagccgcttgcgctcgacgccgcgccggagcgcgtggacgtg
gagacgccggcggaggtgaagtcgtaccaggagacgcagaacggccccgccgcgctcttc
aggcggcgtcgcaggcacctgccctcgatcgagtcgcgggccgcgctgccgggtcagccg
gcgcccgcccaggagcgagcggaggagcagtgggacggagcggtggagcagagtgcgccc
gcgccgcgccgcgggttccagttcggcggcgagaaggtcctcatcgtcgacgacgacatc
cgtaacgtcttcgcgctcaccagcgtcctggagcagcacggtctgtcggtcctgtacgcg
gagaacggccgggagggcatcgaagtcctggagcagcacgacgacgtgacggtcgtgctc
atggacatcatgatgccggagatggacggctacgcgacgacgacggcgatccggcggatg
ccgcagttcgccggcctgccgatcatcgccctcacggcgaaggcgatgaagggcgaccgg
gagaaggccatcgagtccggggcgtccgactacgttacgaagccggtcgatcccgaccat
ctgctctctgtgatggagcagtggatgcgcggtgagtga
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