Streptomyces citrinus: V2W30_29460
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Entry
V2W30_29460 CDS
T11106
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
scit Streptomyces citrinus
Brite
KEGG Orthology (KO) [BR:
scit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scit03009
]
V2W30_29460 (rimO)
Enzymes [BR:
scit01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
V2W30_29460 (rimO)
Ribosome biogenesis [BR:
scit03009
]
Prokaryotic type
ribosomal protein modification factors
V2W30_29460 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
WWQ67048
LinkDB
All DBs
Position
6320676..6322145
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AA seq
489 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLEADGWELVEDAEAADVAVVNTCGFVEAAKKDS
VDALLEANDLKGHGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYEDISGRLQTIL
AGGSVEAHAPRDRRKLLPISPAERQDAGAGVALPGHAPVDLPDGLAPASGPRAPLRRRLD
GAPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLNETRWLAEQGVKEVMLVSENNT
SYGKDLGDIRLLESLLPELAGVDGIERVRVSYLQPAEMRPGLIDVLTGTDKVVPYFDLSF
QHSAAGVLRSMRRFGDTDRFLELLDTIRTKAPQAGVRSNFIVGFPGESESDLAELERFLN
GARLDAIGVFGYSDEDGTEAATYENKLDEDVVAQRLAHISRLAEQLVSQRAEDRLGETVE
VLVESVDESEDGEGVVGRAAHQAPETDGQVRLTGGTGLTVGRMVEAKVVGTEGVDLVAEP
LDCTEEAAR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgtaccgtcgcacttgtcacccttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcttggaggcggacggctgggagctcgtcgaggacgccgag
gccgccgatgtcgccgtcgtgaacacctgtggcttcgtcgaagccgccaagaaggactcc
gtcgacgccctcctcgaagccaatgacctcaaggggcatggcagaacccaggccgtcgtg
gccgtgggctgcatggccgagcgctacggcaaggagctcgccgaggcgctgcccgaggcc
gacggcgtgctcgggttcgacgactacgaggacatctccggccgcctccagaccatcctc
gcgggtggcagcgtggaggcgcacgccccgcgcgaccgccgcaagctgctgccgatcagc
cccgccgagcgccaggacgccggtgccggcgtcgccctgcccgggcacgctccggtggac
ctgcccgacgggctcgcgcccgcttccggaccgcgcgcgccgctgcgccgccggctcgac
ggggcgcccgtggcctccgtgaagctggcctccggctgcgaccggcgctgttccttctgc
gccatcccgtcgttccgcggctccttcatctcgcgacgacccagcgacgtgctgaacgag
acgcgctggctcgccgagcagggtgtcaaggaggtcatgctggtctccgagaacaacacc
tcgtacggcaaggacctgggtgacatccgtctcctggagtcgctgctgcccgagctggcc
ggtgtcgacgggatcgagcgggtgcgcgtcagctacctgcaacctgccgagatgcgaccg
ggactgatcgatgtcctgacgggaaccgacaaggtcgtgccgtacttcgacctttccttc
cagcactcggcggcgggcgtgctgcgttcgatgcgccgcttcggtgacaccgaccgcttc
ctggagctgctcgacaccattcggaccaaggccccgcaggccggtgtccgctcgaacttc
atcgtgggcttccccggcgagtccgagagcgacctcgccgagctggagcggttcctgaac
ggggcgcggctcgacgccatcggtgtgttcggctactccgacgaggacggcacggaagcc
gccacgtacgagaacaagctcgacgaggacgtcgtcgcgcagcgcctcgcccacatctcg
cgcctcgccgagcagctggtgtcgcagcgcgccgaggaccgcctcggtgagaccgtcgag
gtgctcgtcgagtccgtggacgagtccgaggacggcgagggcgtggtcggccgcgccgcg
caccaggcgcccgagacggacggacaggtgcggctcacgggcggcacgggtctgacggtc
ggccgtatggtcgaggcaaaggtggttggcaccgagggcgtggacctcgtggccgagccg
ctcgactgtactgaggaggcggccagatga
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