Spiroplasma cantharicola: SCANT_v1c00100
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Entry
SCANT_v1c00100 CDS
T04084
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
scj
Spiroplasma cantharicola
Pathway
scj03030
DNA replication
scj03430
Mismatch repair
scj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCANT_v1c00100 (holB)
03430 Mismatch repair
SCANT_v1c00100 (holB)
03440 Homologous recombination
SCANT_v1c00100 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scj03032
]
SCANT_v1c00100 (holB)
03400 DNA repair and recombination proteins [BR:
scj03400
]
SCANT_v1c00100 (holB)
Enzymes [BR:
scj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SCANT_v1c00100 (holB)
DNA replication proteins [BR:
scj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SCANT_v1c00100 (holB)
DNA repair and recombination proteins [BR:
scj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SCANT_v1c00100 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
ALD65920
UniProt:
A0A0M4KDQ4
LinkDB
All DBs
Position
12063..12809
Genome browser
AA seq
248 aa
AA seq
DB search
MKKVEVFSIVNELIKNKKLYHSIIISNENQTNLDEISTEILRQIYCLNNSFENDGCDWCL
KVVNKNNLNIFYIGDSISKISKDDIKELIIKFSSSGIEDNKNKVYILANGENLSESASNA
LLKFLEEPPKNTYALILTKDRNKILSTIKSRCKLFSIENEIIKEKFDSQIIKFFLNKEKK
KLLKYLISFKKMERSEIIADLNIAFENSIDLNIKFLQELLLDTINEIKETNYINLILENL
FIKMYEVI
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtagaggtatttagtattgttaatgaattgataaaaaataaaaaactttac
cattcaataataatttcaaacgaaaatcaaactaatcttgatgaaatctcaacagaaatt
ttaagacaaatatattgtttaaataattcctttgaaaatgatggttgtgattgatgttta
aaagttgttaataaaaacaatctaaatattttttatattggagactcaatatcaaaaata
tcaaaggatgatattaaagaattaattataaaattctcttcttcaggaattgaagacaat
aaaaataaagtttatatattggctaatggagaaaacttaagtgaaagtgcgtctaatgcg
ctacttaaatttttagaagaacctcctaaaaatacttatgctttaattttaacaaaggat
agaaataaaattttgagcacaattaaatcaagatgcaaacttttttctattgaaaatgaa
attattaaagaaaaatttgattcacaaattataaaattctttttaaataaagagaagaaa
aaattattaaaatatttgataagttttaagaaaatggaaagatcagaaattatagcagat
ttaaatattgcttttgaaaattctatagatttaaatataaaatttttacaagaactttta
ttggatacaataaatgaaataaaagaaacaaattatattaatttaattttggagaatttg
tttataaaaatgtatgaggtaatctaa
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