| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
scj Spiroplasma cantharicola
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:scj00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SCANT_v1c00470 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:scj03021]
SCANT_v1c00470 (rpoC)
03400 DNA repair and recombination proteins [BR:scj03400]
SCANT_v1c00470 (rpoC)
Enzymes [BR:scj01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SCANT_v1c00470 (rpoC)
Transcription machinery [BR:scj03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SCANT_v1c00470 (rpoC)
DNA repair and recombination proteins [BR:scj03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SCANT_v1c00470 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
45731..49480
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| AA seq |
1249 aa
MAISNKRMIKIELASPDVIRSWSRGEVTKPETINYKTLKTEKEGLFDERIFGPTRNYECA
CGKYKKVKNKGKVCERCGVEITESIVRRERMGHIELEEPVTHIWMLKVAPSRIASILDLK
TKEVEEVVYFVSYIVLDPGSSKHLKKGMVLDLGNAKASLKTREKLLKTLEDIKAGIEPDT
FSWKRAENLINQLRTPSLPFSMDEAATFISRYINAKFGIGANAIEDLLKNINLEKEIEKI
RYDLKEKRGSSEQNKLMKRLEVLDSLKKSKSRPEWMILHVIPVIPPDIRPIIQLDGGRFT
TSEINDLYRRIIIRNERLKKVKSMGAPSIIVNNEKRMLQEAVDALLDNERKPRPVTGKDK
RPLKSLTSILKGKQGRFRQNLLGKRVDYSGRSVIAIGPDLKMYQAGIPRDMAITLFKPFI
IRRLQEKDFAENVKVAEKMILTNDAKVWDVLEEVIKDRPVLLNRAPTLHRLGIQAFEPKL
VKGKAIRLHPLVTTAFNADFDGDQMAVHLPISDEAVAEARALMLGSKAILGPKDGKPIVT
PTQDMILGNYYITTEEKGVLGEGTLFASYDEVKIAYETDSVSLNAIVAIPISELKNKKIS
DKHKDKFLITTVGKIFFNQMFVEEFPWIVNANINNAEEEIEKFVIDGNTDIRTYIAKDYQ
IQQPIKKKELSSIIERYFKLFGAQRTAQMLDNMKDLGFKFSSKSGTTISAADVVAYTQKF
EDFKIADEKVTQITNFYNMGMLTKTEKKRRVITVWSQVKDKIQNKLEEVLKKDPKNPVFV
MADSGARGNVSNFTQLVGMRGLMNDPKGDIKEIPIKSSFREGLTVSEYFISTHGARKGMA
DVALKTADSGYLTRRLVDISQEIIVTEDDCKTSKGFDVHSIIETKHDNIIVPLKDRLVGR
FTFNDVVTKKGKTIVGANELITLQIADDIINAGIEEVQIRTVLTCDTNRGVCRKCYGINL
ATGEIVTIGEPVGVIAAQSIGEPGTQLTMRTFHTGGVAGGADITQGLPRIKELLDVTNPK
GSIAIISQIDGVIKEAKEEEGIITIVVSSEQDERKYKSQYGAILRVSEGEVVTRGQKLTE
GAINIKELLEVARIEDVQNYILKEVQKVYRLQGIEISDKYIEIIVKQMLNKVKIIDSGET
ELLPGEVISSRTFRNEVKIAIMAGKKPPLAKHVIFGIKKAPLESDSWLSSASFQDTARVL
VKAVIKGKIDKLEGLKENIMLGNLIPAGTGLTGSADIIKKGKETYDSEY |
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| NT seq |
3750 nt +upstreamnt +downstreamnt
atggcaatttcaaataaaagaatgattaaaattgaattagcttctccagacgtgattaga
tcttgatcacgtggtgaagttacaaaaccagaaacaataaactataaaacattaaagaca
gaaaaagaaggtctatttgatgaaagaatctttggacctacaagaaattatgaatgtgct
tgtggaaaatacaaaaaagtaaaaaacaaaggtaaagtctgtgagcgttgtggagtagaa
attactgaatcaattgttagacgtgaaagaatggggcatattgagctggaagaaccagta
actcatatctgaatgttaaaagtagcaccttcaagaatagcttcaattttagatttaaaa
accaaagaagttgaagaagttgtttattttgtaagttatattgttttagatccaggaagt
tcaaaacaccttaaaaaaggaatggttttagatttaggaaatgctaaagcaagtttaaaa
acaagagaaaaattattaaaaacacttgaagatattaaagctggaatagaaccagataca
ttttcttgaaaaagagcagagaacttaattaatcagttgagaactccaagtttaccattt
tcaatggatgaagcagcaactttcatttcaagatatattaatgcaaagtttggaattggt
gctaatgcaattgaggatttattaaaaaacattaatttagaaaaagaaattgaaaaaatc
agatatgacttaaaagaaaaaagaggttcatctgaacaaaacaaattaatgaaacgttta
gaagttttagattctttaaaaaaatcaaaatcaagaccagaatgaatgattttacatgtt
attccagtaatcccaccagatataagaccaattattcaattggatggtggtagatttact
acttctgaaattaacgatttatatagaagaataattattagaaatgaacgtctaaaaaaa
gttaaatcaatgggagctccaagcattattgttaataatgaaaaacgtatgcttcaagaa
gcagttgacgctttattagataacgaacgtaaaccaagaccagttactggtaaagataaa
cgtcctttaaaatcattaacatcaattttaaaaggtaagcaaggaagattccgtcaaaac
cttttaggaaaacgtgttgactattcaggtcgttcagttattgctattggtccagattta
aaaatgtaccaagctggtatcccaagagatatggcaattacattattcaaaccatttatc
attagaagattacaagaaaaagattttgcagaaaatgtaaaagttgcagaaaaaatgatt
ttaacaaatgatgctaaagtttgagatgtgttagaagaagtaattaaagatagaccggtt
ttattaaaccgtgctcctactcttcaccgtttaggtattcaagcttttgaaccaaaatta
gttaaaggtaaagcaattagacttcacccattagtaactacagctttcaatgctgacttc
gatggtgaccaaatggctgtccatttaccaattagtgatgaagcagttgctgaagcgaga
gcacttatgttaggttcaaaagcaattcttggaccaaaagatggtaaaccaattgttaca
ccaactcaggatatgattttaggaaactattacataacaactgaagaaaaaggtgttctt
ggagaaggaactttatttgcaagttatgacgaagtaaaaattgcatatgaaactgattct
gtttcattaaacgccattgttgcaattccaattagtgaacttaaaaataaaaaaatatca
gataaacacaaagataaattcttaattacaactgttggtaaaattttctttaatcaaatg
tttgttgaagaattcccttgaattgttaatgcaaatattaacaatgcagaagaagaaatt
gagaagtttgttattgatggaaatactgatataagaacttatattgcaaaagattatcaa
attcaacaaccaattaagaaaaaagaattgtcttcaattattgaaagatactttaaatta
tttggagcacaaagaactgctcaaatgttagataatatgaaggatttaggatttaaattc
tcatcaaaatctggaacaacaattagtgctgctgacgttgttgcttatacacaaaaattt
gaagactttaaaattgcagatgagaaggtaactcaaattactaatttctataatatgggt
atgttaacaaaaactgagaaaaaacgtagagtaattactgtatgatctcaagtaaaagat
aaaattcaaaataaacttgaagaagttctaaaaaaagatccaaaaaatccagtatttgtt
atggcagattcaggagctcgtggtaacgtttcaaactttactcagttagtaggtatgagg
ggacttatgaatgaccctaaaggtgatattaaagaaattccaattaagtcatcattccgt
gaaggtctaactgtttcagaatattttatttctactcacggagcaagaaaaggtatggct
gacgttgccttgaaaacagctgactcaggatatttaacaagaagacttgttgatatttca
caagaaattattgtaactgaagatgattgtaaaacatcaaaaggatttgatgtgcattca
attattgaaactaagcatgataatataattgttcctttaaaagatagacttgttggaaga
tttactttcaatgatgttgtaactaaaaagggaaaaacaattgttggagctaatgaatta
ataacattacaaattgctgatgatattattaatgctggtattgaagaagttcaaattaga
acagttttaacatgtgatacaaaccgtggagtatgtagaaaatgttatggtataaactta
gcaacaggagaaatcgttacaattggtgaacctgttggagttattgcagcccaatcaatt
ggtgaacctggtactcagctaactatgcgtactttccatactggaggggttgctggggga
gcagatattactcaaggtctacctcgtattaaagaattacttgacgttacaaatcctaaa
ggttcaattgctataatttcacaaattgatggtgtgataaaagaagcaaaagaagaagaa
ggaataattacaattgttgtatcatctgaacaagatgaaagaaaatacaaatcacaatat
ggagctattttaagagtttctgaaggtgaagttgtaactcgtggtcaaaaattaactgag
ggtgcaataaacatcaaagaattattagaagttgcaagaattgaagatgtacaaaattac
attctaaaagaagtacaaaaagtatatcgtttacaagggattgaaatttcagataaatat
attgaaattattgttaaacaaatgttgaacaaagttaaaattattgattcaggagaaact
gaattacttcctggagaagttatttcttcaagaacatttagaaatgaagttaaaattgca
attatggcaggtaaaaaaccaccacttgcaaaacatgttatctttggtattaaaaaagca
ccacttgaatcagattcatgattatcaagtgcttcattccaagatactgcaagagttctt
gtaaaggctgtaatcaaaggaaaaattgataaattagaaggattaaaagaaaacattatg
ttaggaaacttaatcccagctggaacaggcctaactggtagtgcagatattattaaaaaa
ggtaaggaaacttacgactcagaatattaa |
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