Spiroplasma cantharicola: SCANT_v1c00970
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Entry
SCANT_v1c00970 CDS
T04084
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
scj
Spiroplasma cantharicola
Pathway
scj03420
Nucleotide excision repair
scj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SCANT_v1c00970 (pcrA)
03430 Mismatch repair
SCANT_v1c00970 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scj03400
]
SCANT_v1c00970 (pcrA)
Enzymes [BR:
scj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SCANT_v1c00970 (pcrA)
DNA repair and recombination proteins [BR:
scj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SCANT_v1c00970 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SCANT_v1c00970 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
PcrA_UvrD_tudor
ResIII
B3
Motif
Other DBs
NCBI-ProteinID:
ALD66007
UniProt:
A0A0M4KDU5
LinkDB
All DBs
Position
101933..104101
Genome browser
AA seq
722 aa
AA seq
DB search
MIKELLKELNDEQLDSVITTDVPVRIIAGAGSGKTRVITTKIAYLIEKEGIYPPKILAVT
FTNKAAQEMKDRVNKIIPNLDRNPLITTFHSFCVRVLREDCEDIGISKDFTIIDASDQAK
IIRDIIKKLDISTDKNRPERKILSKISNWKAKQIDWNEAYEETFNFEEKKWAKAYRDYQQ
YLYDKNYLDFDDLILKVHKLFNENIQIREKWRNRFDYIMVDEFQDTNYTQFDLVKWLTGS
KNNLTVVGDPDQTIYSWRGAKVNIILNFKNEFANSRTIMLTENYRSTKPILDIANNFIDN
NKNREKKDIFTQKKAGEIVQVKEVASRNFEAKFVTKKIKELVEENNYKYSDIFVLYRTNA
WSQEFEKEFQNQKVPFQLIGGFKFRDRKVIKDVTALLRSVVFKDDLAMERVFTFTPKVGA
VTASKLKIASEQLNLNLFDFLTSQNQEVNQISKNLNELVACLIKAREIFEENKSILKLTE
TLIKESGYRDRLDLKDKEDIEALQNLEAYYDQMEKYDNYYNESENELNRAVMFLQEEALS
SDEDNQSEINKVTLLTIHSAKGLENKVVFIVGLNKDVFPSKMSFLSIENLEEERRAFYVA
ITRAQERVFISYVSGEYSYISNGELGPSRFIQELNPELYEIEKSIYFHSNTDVSSTYKGK
ANLEFRPDKLEAGVIKGDKIKHMIFGDGLVVKVIDRYISVAFSDPKQGVKMIPISSSAWE
KI
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgataaaagaactattaaaagaattaaatgatgagcaactagattcagtaatcactaca
gatgttcctgtaagaataattgcaggagcaggtagtggaaaaacaagagttataacaact
aaaatagcgtatttaatagaaaaagaaggaatttatccaccaaaaatattagcagttact
tttacaaataaagcagctcaggaaatgaaagatcgagttaataaaataattccaaatttg
gatagaaatccgttaattacaacttttcactctttttgtgtcagagtacttagagaagat
tgcgaagatataggaatatcaaaggattttactattattgatgcatcagatcaggcgaag
ataattagagatataattaaaaaacttgatattagcactgataaaaatagaccagaaaga
aaaattttatcaaaaataagtaattgaaaagcaaaacaaattgattgaaatgaagcttat
gaagaaactttcaattttgaagaaaaaaaatgagcaaaagcatatagagattatcaacaa
tatttatatgataaaaattatttagattttgacgatttaattttaaaggttcataaactt
tttaatgaaaatatacaaataagagaaaaatgaagaaatagatttgattatataatggtt
gatgaatttcaagatacaaattacactcaatttgatttggttaaatgattaacaggttca
aaaaataatttaacagttgttggagacccagatcaaactatttactcatgaagaggggca
aaagttaatattattcttaattttaaaaatgaatttgcaaattcacgtacaataatgtta
actgaaaattatagatcaacaaaaccaattttggatatagcaaataattttattgataat
aataaaaatagagaaaaaaaagatatttttactcaaaaaaaagcgggagaaattgttcaa
gtaaaagaagtggcttcaagaaattttgaagcaaaatttgtaactaaaaaaattaaggaa
ttagttgaagaaaataattataaatactcagatatttttgtactttatagaacaaatgct
tgatctcaagaatttgaaaaggagtttcaaaatcagaaagttccatttcaacttattggt
ggatttaagtttagagatagaaaagtaattaaagatgtaactgcacttttgcgttcagtt
gtttttaaagatgacttagctatggaaagagtttttacatttactcctaaagtaggagct
gtaacagcttcaaaattaaaaattgcttcagagcaattgaacttaaacttatttgatttt
ttgacatctcaaaatcaagaagtcaatcaaatatcaaaaaatttaaatgaactggttgct
tgtttaataaaagcaagagagatttttgaagaaaataagagtatattaaagttaacagaa
actttaattaaagaatctggttatagagaccgattagatttaaaagataaagaagatatt
gaagcactacaaaatttagaagcttattatgaccaaatggaaaaatatgataattattat
aatgaatctgaaaatgaattaaatagagcagtcatgtttctacaagaagaagctttatca
agcgatgaagataatcaaagcgagataaataaggttactttattaacaattcattccgca
aagggattagaaaacaaagtagtatttattgtaggtttaaataaagatgtatttccttca
aaaatgagttttttatcaattgaaaatcttgaagaggaaagaagagccttttatgttgct
attacaagagcacaggaaagagtatttatatcgtatgtatctggagaatattcttatatt
tctaatggagaattaggaccttcaagatttattcaagaacttaatcctgaattatatgaa
attgaaaaaagtatttattttcactcaaatactgatgtttcaagtacttataagggaaaa
gcaaatttagagtttagacctgataaattagaagctggagttattaagggagataaaata
aagcatatgatatttggagatggactagttgttaaagttattgataggtatatctcagtg
gcattttcagaccccaaacaaggggttaaaatgataccaattagctctagtgcatgagaa
aaaatataa
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