Spiroplasma cantharicola: SCANT_v1c02650
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Entry
SCANT_v1c02650 CDS
T04084
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
scj
Spiroplasma cantharicola
Brite
KEGG Orthology (KO) [BR:
scj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scj03032
]
SCANT_v1c02650 (hupB)
03036 Chromosome and associated proteins [BR:
scj03036
]
SCANT_v1c02650 (hupB)
03400 DNA repair and recombination proteins [BR:
scj03400
]
SCANT_v1c02650 (hupB)
DNA replication proteins [BR:
scj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SCANT_v1c02650 (hupB)
Chromosome and associated proteins [BR:
scj03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SCANT_v1c02650 (hupB)
DNA repair and recombination proteins [BR:
scj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SCANT_v1c02650 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ALD66175
UniProt:
A0A0M4K0Y1
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All DBs
Position
306314..306589
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AA seq
91 aa
AA seq
DB search
MTKKELSEKISAEFGNTKADAEKMINFVFDEIVNALVNKEEVAIAGFGKFVTTERASREG
VNPATGAKIQIAATTVAKFKVAKQLKEAVAK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaaagaattatctgaaaaaatttcagcagaatttggtaatacaaaagctgat
gctgaaaaaatgattaactttgtatttgatgaaattgtaaatgctctagttaataaagaa
gaagttgcaattgcaggatttggtaaatttgttacaactgagagagcatctcgtgaaggt
gttaacccagcaactggagcaaaaatccaaattgctgcaacaactgtagcaaaatttaaa
gtagctaaacaattaaaagaagcagttgctaaataa
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