Spiroplasma cantharicola: SCANT_v1c03660
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Entry
SCANT_v1c03660 CDS
T04084
Symbol
cshB
Name
(GenBank) ATP-dependent RNA helicase CshB
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
scj
Spiroplasma cantharicola
Brite
KEGG Orthology (KO) [BR:
scj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scj03019
]
SCANT_v1c03660 (cshB)
03009 Ribosome biogenesis [BR:
scj03009
]
SCANT_v1c03660 (cshB)
Enzymes [BR:
scj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SCANT_v1c03660 (cshB)
Messenger RNA biogenesis [BR:
scj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SCANT_v1c03660 (cshB)
Ribosome biogenesis [BR:
scj03009
]
Prokaryotic type
rRNA helicases
SCANT_v1c03660 (cshB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ALD66276
UniProt:
A0A0M5KLH3
LinkDB
All DBs
Position
423673..425040
Genome browser
AA seq
455 aa
AA seq
DB search
MKFSDFGFKKFINDALEEIGFVYPTKIQEKVIPLIKKHRPVIAQSHTGTGKTHSFLLPIL
NNIAYDESNKIQCLIVTPTRELARQIYENTKDILKFNDKGTVGLFVGGDDIEKSIQNVKT
KQPTVVIGTPTRLKKMYEEGNLFITTAKYVVIDECDMIFDLGFIEEVDFMLSKINKDVNV
SLFSATINNGLKPFLQKYLSNSIFIENKDANPTNKNIEHVLVWTKNKENKEVLRTIVSEI
NPYVCMVFLNKKDQIKEIISWLNEFGIKNVGELHGDLDSRQRTNMQKRIQNGDFKWIVAS
DVAARGIDIDGVSHIISVDLPKDLDYYIHRSGRTGRNQYSGQSYVLFNSTNQHQIDELKS
KGITFSNFKLANNQLVEINTVKKKKDFNANLPVNVETKKIIDKYKGQKVKPGYKKRRKAE
VDKVKKDIRRKHIKESIAKIKKDKYKKRREELFEN
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttcagattttggatttaaaaaatttataaatgatgcattagaagaaataggt
tttgtttatccaactaaaattcaagaaaaagttattcctcttataaagaaacatagacct
gttattgctcaatcacatacaggaactggaaaaactcattcatttttattgcctatctta
aataatattgcatatgatgaatctaataaaattcaatgtttaatagtaactccaacaaga
gaacttgctagacaaatttatgaaaatactaaagatattttaaagtttaatgataaggga
actgttggtttatttgttggcggtgatgatattgaaaaatcaattcaaaatgttaaaaca
aagcaaccaactgtagtaattgggacaccaacaagattaaaaaaaatgtatgaagaaggt
aatttatttattactactgcaaagtatgttgtaattgatgagtgtgatatgatatttgat
cttggttttattgaagaagttgattttatgctatcaaagataaacaaagatgtgaatgtt
tcattattttcagcaacaattaataatggtttaaaaccttttttacaaaaatatttatct
aattcaatttttattgagaataaggacgcaaacccaacaaacaagaatattgaacatgtt
cttgtttgaacaaaaaataaagaaaataaggaagttcttagaacaattgttagtgaaatt
aatccctatgtttgtatggtttttttaaataaaaaagatcaaattaaagaaatcatttct
tgattgaatgaatttggtattaaaaatgtaggtgaattacatggagacttagattcaaga
caaagaactaatatgcaaaagcgaattcaaaatggagattttaagtgaatagtagcttct
gacgtggctgcaagagggatcgatattgatggagtgagtcatattatttcagttgacctg
ccaaaagatttagactactatattcacagaagtggtagaactggaagaaatcaatattca
ggacaaagttatgttttatttaactctacaaaccaacatcaaattgatgagcttaaatct
aaaggaattacattttcaaactttaaattagcaaataatcaattagttgaaattaatact
gttaagaagaaaaaagactttaatgctaatttaccagtgaatgtcgagaccaaaaaaatt
attgataaatataagggtcaaaaagttaaacctggatataaaaaacgcagaaaagcagaa
gttgataaagttaaaaaagacattagaagaaaacatattaaggaatcaattgctaaaatt
aaaaaagataaatataaaaaacgtagagaagagttatttgagaattaa
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