Spiroplasma cantharicola: SCANT_v1c04940
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Entry
SCANT_v1c04940 CDS
T04084
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
scj
Spiroplasma cantharicola
Pathway
scj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SCANT_v1c04940 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scj03400
]
SCANT_v1c04940 (ruvB)
Enzymes [BR:
scj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SCANT_v1c04940 (ruvB)
DNA repair and recombination proteins [BR:
scj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SCANT_v1c04940 (ruvB)
RecFOR pathway proteins
SCANT_v1c04940 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
RuvB_C
AAA
AAA_5
AAA_lid_4
AAA_2
TIP49
Sigma54_activat
Rad17
Mg_chelatase
DUF815
Sigma54_activ_2
AAA_14
ResIII
RNA_helicase
nSTAND3
Bac_DnaA
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ALD66400
UniProt:
A0A0M4K1D4
LinkDB
All DBs
Position
570737..571681
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AA seq
314 aa
AA seq
DB search
METNIFRPNSLEEFIGQKNIINNLNVFVMSAQKRNKNLDHILIHGPSGLGKTSLGYLVSK
IINKKIHILNGQSLQKPSDIISPLTSLKENEILFIDEIHSVSKEIFEVLYPVLEDNKLNI
IVGKEYNSKVVNIKLANFTLIGATTEINKLVEPFKNRFSILFHFQHYSDNEITEIIKLNC
KKLNMNLDIEVIKYISKFCQNTPRVAINLLKRIYDYIIILELKNVNIEIIKNIFLELEIY
KFGLSNQELLYLKLLYKHSTLGIETIQQVMGLQQQIIIKTIEPILIRNFLIEKTVKGRKI
TEKAILWLEKENLI
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggaaactaatatttttagaccgaatagtttagaagagtttattggtcaaaaaaatata
attaataatttaaatgtatttgtaatgtcagctcagaaaagaaataaaaatttagatcat
attcttattcatggtccttcagggttagggaaaacaagtttaggttatttggtttcaaaa
ataataaataaaaaaattcatattttaaatggacagagcttacaaaaaccaagtgatata
atttcaccgttaacatctttaaaagaaaatgaaattttatttattgatgagatacattct
gtttccaaagaaatttttgaagtattatatccagtcttagaagataataagttaaatata
atagtaggtaaagaatataattcaaaagttgtaaatataaaattggcaaactttacttta
attggagcaacaactgaaataaataaattagtagagccatttaagaatagattttcaatt
ttatttcattttcaacattatagtgacaatgaaataacagaaataattaaattaaattgc
aaaaaattaaatatgaatttagacattgaggtaataaaatatatttcaaagttttgccaa
aacactccaagagttgcaattaatctgttaaaaagaatttatgattacattataatttta
gaattaaaaaatgttaatatagaaattattaaaaatatttttttggaattagaaatttat
aaatttggtctaagtaatcaagaattattgtatttaaaacttttatataaacattcaaca
ttagggattgaaaccattcaacaagttatgggtttgcaacaacaaataattattaagaca
attgaaccgatattaattagaaattttttaattgaaaaaacagttaaaggaagaaaaata
actgaaaaagcaattttatgattggaaaaagaaaatttaatttaa
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