Spiroplasma citri: SCITRI_001303
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Entry
SCITRI_001303 CDS
T04628
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sck
Spiroplasma citri
Brite
KEGG Orthology (KO) [BR:
sck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sck03016
]
SCITRI_001303 (truB)
Enzymes [BR:
sck01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SCITRI_001303 (truB)
Transfer RNA biogenesis [BR:
sck03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SCITRI_001303 (truB)
Prokaryotic type
SCITRI_001303 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
APE75180
LinkDB
All DBs
Position
complement(1094162..1095082)
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AA seq
306 aa
AA seq
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MVIMHDGIFLINKPTGKTSNQVIQEIKQKLEINKIGHAGTLDPLATGLLVVLINNATKMS
EYLLTADKAYDVEMRLFIETDTGDITGNVLNKTAPFKIQKKVLKKIFNEFNGFMYEQYPP
KYSAIKVNGKKLYEYARQDKEVKIKPRTVTIKAIKLKKYDAHNHTIKFSVLCTKGTYIRS
LVTDIAAKLNTIATVTALCRTQSGNFLLSKAISPETVNFNELISMYDALFTNNQQLLLYH
HDEEIRQGKPIVIIKHTDPIIFIIDKNKNVLAIYKHIGKHVYACQRGLWSHIEPKKQDDR
EKGDHY
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtggttattatgcatgatggtatttttttaatcaataaaccaacaggaaaaacaagtaat
caagttattcaagaaattaaacaaaaattagagattaataaaattggtcacgcaggaaca
ttagacccattagcaacaggattgttagttgttttaataaataatgctactaaaatgagt
gaatatttgttaacagcagataaagcctatgatgttgaaatgcgcttatttattgaaaca
gatactggtgatattactgggaatgttcttaataaaacggctccatttaagattcagaag
aaggtattaaaaaaaatttttaatgaatttaatggatttatgtatgaacaatatccgccc
aaatattctgctattaaagttaatggtaaaaaactttacgaatatgctcgccaagataaa
gaagtaaaaattaaaccaagaactgttacaattaaggcgattaaattaaaaaaatacgat
gctcataatcatacaattaaatttagcgtgttatgtactaagggcacatatattagaagt
ttagtgactgatattgcggcaaaattaaatactattgctactgttacagctttatgccgc
acgcaatcagggaattttttgttatctaaagcaattagccctgaaacagtaaattttaat
gagttaatatcgatgtatgatgctttatttactaataaccaacaattattactttatcat
catgatgaagaaattcgacaaggaaaacccattgttattattaaacatactgacccaatt
atttttattattgataaaaataaaaatgttttagcaatttataaacatattggaaaacac
gtatatgcttgtcaacgtggattatgatcacatattgagcctaaaaaacaagatgataga
gagaagggcgatcattattaa
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