Spiroplasma citri: SCITRI_001486
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Entry
SCITRI_001486 CDS
T04628
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
sck
Spiroplasma citri
Brite
KEGG Orthology (KO) [BR:
sck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sck03032
]
SCITRI_001486 (hupB)
03036 Chromosome and associated proteins [BR:
sck03036
]
SCITRI_001486 (hupB)
03400 DNA repair and recombination proteins [BR:
sck03400
]
SCITRI_001486 (hupB)
DNA replication proteins [BR:
sck03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SCITRI_001486 (hupB)
Chromosome and associated proteins [BR:
sck03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SCITRI_001486 (hupB)
DNA repair and recombination proteins [BR:
sck03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SCITRI_001486 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_1
HU-HIG
Ulvan_lyaseC
Urease_beta
GNC1_N
Motif
Other DBs
NCBI-ProteinID:
APE75361
UniProt:
Q14MP3
LinkDB
All DBs
Position
complement(1227355..1227639)
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AA seq
94 aa
AA seq
DB search
MSKKELAAQIAEKFTDVLSKTHAEEITNFVFDHIKKALVAGKEVSIAGFGKFAVTERAAR
DGRNPSTGETIKIPASKSAKFKAGKQLKTDLNNN
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaaagaactagcagcgcaaattgccgaaaaatttactgatgtgttatcaaaa
acacatgcagaagaaattacaaattttgtttttgatcatattaaaaaagctttagttgct
ggaaaagaagtctcaattgcaggatttgggaaatttgctgtaaccgaaagagcagcaaga
gatggaagaaatccgtcaacaggagaaacaattaaaattccagcttctaaatcagctaaa
tttaaagcaggtaaacaattaaaaactgatttaaacaataattaa
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