KEGG   Spiroplasma citri: SCITRI_001486
Entry
SCITRI_001486     CDS       T04628                                 
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
  KO
K03530  DNA-binding protein HU-beta
Organism
sck  Spiroplasma citri
Brite
KEGG Orthology (KO) [BR:sck00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sck03032]
    SCITRI_001486 (hupB)
   03036 Chromosome and associated proteins [BR:sck03036]
    SCITRI_001486 (hupB)
   03400 DNA repair and recombination proteins [BR:sck03400]
    SCITRI_001486 (hupB)
DNA replication proteins [BR:sck03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    SCITRI_001486 (hupB)
Chromosome and associated proteins [BR:sck03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    SCITRI_001486 (hupB)
DNA repair and recombination proteins [BR:sck03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      SCITRI_001486 (hupB)
SSDB
Motif
Pfam: Bac_DNA_binding HU-CCDC81_euk_1 HU-HIG Urease_beta GNC1_N
Other DBs
NCBI-ProteinID: APE75361
UniProt: Q14MP3
LinkDB
Position
complement(1227355..1227639)
AA seq 94 aa
MSKKELAAQIAEKFTDVLSKTHAEEITNFVFDHIKKALVAGKEVSIAGFGKFAVTERAAR
DGRNPSTGETIKIPASKSAKFKAGKQLKTDLNNN
NT seq 285 nt   +upstreamnt  +downstreamnt
atgtcaaaaaaagaactagcagcgcaaattgccgaaaaatttactgatgtgttatcaaaa
acacatgcagaagaaattacaaattttgtttttgatcatattaaaaaagctttagttgct
ggaaaagaagtctcaattgcaggatttgggaaatttgctgtaaccgaaagagcagcaaga
gatggaagaaatccgtcaacaggagaaacaattaaaattccagcttctaaatcagctaaa
tttaaagcaggtaaacaattaaaaactgatttaaacaataattaa

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