Spiroplasma citri: SCITRI_001688
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Entry
SCITRI_001688 CDS
T04628
Symbol
pnpT
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sck
Spiroplasma citri
Pathway
sck03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sck00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCITRI_001688 (pnpT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sck03019
]
SCITRI_001688 (pnpT)
03016 Transfer RNA biogenesis [BR:
sck03016
]
SCITRI_001688 (pnpT)
Enzymes [BR:
sck01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SCITRI_001688 (pnpT)
Messenger RNA biogenesis [BR:
sck03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SCITRI_001688 (pnpT)
Transfer RNA biogenesis [BR:
sck03016
]
Prokaryotic type
tRNA degradation factors
SCITRI_001688 (pnpT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
SPATA25
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
APE75557
UniProt:
A0AAJ4JZB4
LinkDB
All DBs
Position
complement(1387415..1389523)
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AA seq
702 aa
AA seq
DB search
MAKQVFKKIINNQELIVEHGQLAKQASGSVLVRYGDTVVLVTATVNNKLSEVDFFPLTVV
FQEKLYSVGKIPGGFLKREGKPSEYGILSARVIDRALRPLFSENFRNEVQIVINVLAVDN
DNDVRMVSLFAASLALSISKIPFAGPVAGALVTVDQKNNIIINPTLEQINDGQMELIVAG
TDEAINMVEAGAKEVSENLMLQAILAGHDVIQQLIAFQHEIIAKVGVPKMEVELFQVRPE
IITYVNNNYAKDLITAARIKEKTKRYETIEHLIEQAIKNYPMPVSLSEKEQKQLTVELKT
ALHNIIRQEVRRQILIDKTRLDGRKLDQIRPLSSEIDILPVVHGSALFTRGETQVLSVVT
LGALGENQIIDGITDEESKRFMHHYNFPAFSVGETGRMGPPSRREIGHGALGEKVLLQII
PSEKVFPYTIRIVSEVLESNGSTSQASICAATLALMAAGVPITAPVVGIAMGLIKEKNNY
TILTDIQGMEDHLGDMDFKVAGTATGICALQMDIKIVGINKAILQEALKAAKKARLTILD
NVLATISAPRTHLAPTAPKMKTFMIPVDKIREVIGPGGKMITAIIEKSDDVKIDIEDDGQ
VTIYHKETTAIEKAYQLIKAIAMPVVVGEKIIGPVVKIEKFGVFVHLKENLDGLIHISKL
AKQHVEKAEDIVQLNDIVKVKVIEIDGKGKIKLQLIEILPKK
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacaagtatttaaaaaaataataaataatcaggaactaattgttgaacatggt
caattagcaaaacaagcaagtggctcagttttagtccgttatggtgacacggttgtttta
gtaacagcaacagttaataacaaacttagtgaagttgatttttttcctttaactgttgtt
tttcaagaaaaattatattcagtgggaaaaatcccggggggatttttaaaacgagaaggg
aaaccatctgaatatgggatcttatcagcacgagtaattgatcgtgctttacgaccatta
ttttcagaaaattttcggaatgaagttcaaattgttattaatgttcttgctgttgataat
gacaatgatgtacgaatggttagtttatttgctgcatcattagcacttagcatttctaaa
attccatttgctggtccagtagcgggtgcattagtaactgttgatcaaaaaaataatatt
attattaatccaacattagaacaaattaatgatggtcaaatggaattaattgttgcagga
actgatgaagcaattaatatggttgaagcgggggcaaaagaagtttcagaaaatttaatg
ttacaagcaattttagcaggccatgatgttattcagcaattaattgcttttcagcatgaa
attattgctaaagttggagttcctaaaatggaagttgagttgtttcaggtccgacctgaa
attattacttatgttaataataattatgcgaaagatttaattacagctgctcgaattaaa
gaaaaaacaaaacgttatgaaacaattgaacatttaattgaacaagcaattaaaaattat
cctatgccagtttcactttcagaaaaagaacagaaacaattgacagtagaattaaaaaca
gccttacataatattattcgccaagaagtgcgccgtcaaattttaattgataaaacgcgt
ttagatggacgaaaattagatcaaattcgaccattaagtagtgaaattgatattttacca
gttgttcatgggagtgctttgtttactaggggtgaaacgcaagttttatcagttgtaaca
ttaggggcgttaggtgaaaaccaaattattgatggaattaccgatgaagaaagtaaacgt
tttatgcatcattataactttccagcattttcagttggtgaaactgggcggatgggtcct
ccttcacggcgagaaattgggcatggggcattaggtgaaaaagtattattacaaattatt
cctagtgaaaaagtgtttccatatacaattcgcattgtttctgaagttttagaatcaaat
ggtagtacttcacaagcatcaatttgtgctgccacattagcgctaatggctgctggggtg
ccaattacagctccagtagttgggattgcaatgggtttaattaaagaaaaaaataactat
actattttaactgatattcaaggtatggaagatcatctcggtgatatggactttaaagta
gccggaacggcaacgggaatttgtgctttacaaatggatattaaaattgttggaattaac
aaagcaattctccaagaagctttaaaagcagcaaaaaaagcacggctaacaattttagat
aatgttttggcaactatttctgcaccacgaacacatttagcaccaacagcaccaaaaatg
aaaacatttatgattcctgttgataagattcgtgaagttattggtccaggtgggaagatg
attacggctattattgaaaaatcagatgatgttaaaattgatattgaggatgatggtcaa
gtgacaatttatcataaagaaacaacggcgattgaaaaagcatatcaattaattaaagca
attgcaatgccagttgttgttggagaaaaaataattggaccagttgttaaaattgaaaaa
tttggtgtctttgttcatttaaaagaaaatcttgatggtttaattcatatttctaaatta
gctaaacaacatgttgaaaaagcagaagatattgttcaattgaatgatattgttaaagtt
aaagtgatagaaattgatgggaaaggaaaaattaagttacaattaattgaaatattacct
aaaaagtaa
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