Spiroplasma citri: SCITRI_0017
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Entry
SCITRI_0017 CDS
T04628
Symbol
karS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sck
Spiroplasma citri
Pathway
sck00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sck00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SCITRI_0017 (karS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sck01007
]
SCITRI_0017 (karS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sck03016
]
SCITRI_0017 (karS)
Enzymes [BR:
sck01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SCITRI_0017 (karS)
Amino acid related enzymes [BR:
sck01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SCITRI_0017 (karS)
Transfer RNA biogenesis [BR:
sck03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SCITRI_0017 (karS)
Prokaryotic type
Other AARSs
SCITRI_0017 (karS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
APE73938
UniProt:
Q14QG4
LinkDB
All DBs
Position
21008..22510
Genome browser
AA seq
500 aa
AA seq
DB search
MEKRNFTEQEQIRRDKLKKLVNDGHNPFIIAKFDRTHTSKVLNEQFNHLSKEILATSSDN
MTVKIAGRIKTFREVGKASFATVQDQNGIFQIYVRNDEVGDEKYQEFINFDLGDIIGVTG
IMMKTNTGELTVRVKEFVLLAKALRALPDKYRGMTDIEEKYRRRYVDLITSTETKDIFIK
RSKIIALMRDFFNSKGYLEVETPVLQPIHGGAAAKPFVTHHNTLDMDFYLRVATELPLKR
LIVGGFEGVYEMGRLFRNEGMDTRHNPEFTTVEIYVAYQDMNFMMQLTEDTICYIAKNIL
NKNETEYDGVMISFQQPWKRWHMVDAIKELVGIDFWKPMTFAEAKKISKEKKVPIEKFHT
SVGHIINLFFEEFVEDKLIQPTFIYGHPVEVSPLAKTNAEDPRFTDRFELFIKGREYANA
YSELNNPVEQYDRFVSQLAERDNGNDEAQELDIDFIEALEYGMPPTGGLGIGIDRLVMLL
TGQDSIKDVLLFPHMRSRGK
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacgtaattttacagagcaagagcaaattagacgtgataagttaaaaaagttg
gttaatgatggacataatccttttataattgccaagtttgaccgaacacatacgagtaaa
gtacttaatgaacaatttaatcatttatcaaaagagatattagccacaagtagtgataat
atgacagttaaaattgcgggtcgaattaaaacatttcgagaagtaggaaaagctagtttt
gcaacagtacaagatcaaaatggaatttttcaaatttatgttcgaaatgatgaagttggt
gatgaaaaatatcaagaatttattaattttgatttgggagatattattggggttactgga
ataatgatgaaaacaaacactggagagttaacagtgcgagttaaagaatttgttttatta
gcaaaagcattacgtgcattgcctgataaatatcgtggaatgactgatattgaagaaaaa
tatcgtcgtcgttatgttgatttaattacatcaacagaaacaaaagatatttttattaag
cgtagtaagattattgctttaatgcgagatttttttaatagtaaaggatatttagaagtt
gagacacctgttttacagcctattcatggtggcgcagcggcaaaaccatttgtaactcat
cataatacattagatatggatttttatttacgagtagcaacagaattacccctaaaacgg
ttaattgttggtggttttgaaggagtttacgaaatggggcgattatttagaaatgaagga
atggacacacgccataatccagagtttacaacagttgaaatttatgttgcatatcaagat
atgaattttatgatgcaattaacagaggatactatttgctacattgcgaaaaacatttta
aataaaaatgaaacagaatatgatggagtaatgatttcatttcaacagccatgaaaacgt
tgacatatggttgatgcaattaaagagttagtaggaattgatttttgaaaaccaatgact
tttgctgaagcaaagaaaatttcaaaagaaaaaaaagtaccaattgaaaaatttcatact
tctgttggacatattattaatttattttttgaagaatttgtggaagataaattaattcaa
ccaacatttatttatggtcatcctgttgaagtttctcccttggcaaaaacaaatgcagaa
gacccaagatttactgatcgatttgaattatttattaaagggcgcgaatatgcaaatgct
tattcagaattaaataatccagttgaacaatatgatcgttttgttagtcaattagcagaa
cgggataatgggaatgatgaagcacaagaattagatattgattttattgaagcattggaa
tatggaatgccaccaacaggtggattaggaattggaattgatcgcttagttatgttatta
acagggcaagattcgattaaagatgtattattattcccccacatgcggtcaagaggaaaa
tag
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