Spiroplasma citri: SCITRI_001842
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Entry
SCITRI_001842 CDS
T04628
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sck
Spiroplasma citri
Pathway
sck03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SCITRI_001842 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sck03400
]
SCITRI_001842 (ung)
Enzymes [BR:
sck01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SCITRI_001842 (ung)
DNA repair and recombination proteins [BR:
sck03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SCITRI_001842 (ung)
Prokaryotic type
SCITRI_001842 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
APE75708
LinkDB
All DBs
Position
complement(1522035..1522703)
Genome browser
AA seq
222 aa
AA seq
DB search
MAMWIKYAVGWGEFFDNEIKKPYFKQLLKNIDNEYQNKLCYPTKTDIFRLFTLIEPNDIK
VVIIGQDPYHGSGQANGLAFSVNDGIKNPPSLVNIFHELKKDLGIDHHASGNLDHWAKEG
VFLYNTIGSVVAKTPLSHKDIGWTNFSQNLIIYLNEIRDDIVYVLWGNYAKQYSEYILNK
SNIIKGAHPSPFSYNLFKDQQFFLKINNLLLKNKKNIIDWKM
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgtgaataaagtacgcagttggttgaggagaattctttgataatgaaattaaa
aagccgtattttaaacaattgttaaaaaatattgataatgagtatcaaaataaactttgc
tatcccacaaaaacagatatttttcgtttgtttacattaattgagccaaatgatattaaa
gttgttattattgggcaagatccatatcatggatctggccaagcaaatggtttagctttt
agtgttaatgatggtattaaaaacccaccaagtttagttaatatttttcatgaactaaaa
aaggacttaggaattgatcatcatgctagtggtaatttagaccattgagctaaagagggt
gtttttttatataatacaattggaagtgttgttgctaaaacccctttaagtcataaggat
attggttgaactaattttagtcaaaatttaattatttatttaaatgaaattcgggatgat
attgtctatgttttatgaggtaattatgcaaagcagtatagtgaatatattttgaataaa
agtaatattattaagggagcacatccatcaccttttagttacaatttatttaaagatcaa
caattttttttaaaaattaataatttacttttaaaaaataaaaaaaacataattgattga
aaaatgtaa
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