Spiroplasma citri: SCITRI_001905
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Entry
SCITRI_001905 CDS
T04628
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sck
Spiroplasma citri
Pathway
sck03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SCITRI_001905 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sck03400
]
SCITRI_001905 (mutM)
Enzymes [BR:
sck01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SCITRI_001905 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SCITRI_001905 (mutM)
DNA repair and recombination proteins [BR:
sck03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SCITRI_001905 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
MCR
zf-FPG_IleRS
Zn_ribbon_6
PSCyt3
Znf_XAF1_N
Zn_ribbon_IS1595
Zn_Ribbon_Prim
Motif
Other DBs
NCBI-ProteinID:
APE75768
UniProt:
Q14QK8
LinkDB
All DBs
Position
complement(1574512..1575345)
Genome browser
AA seq
277 aa
AA seq
DB search
MPELPEVETVRRILTKHVVGKTITDCQIFWNKIIKYPLDSKEFIKEIVKQKINRIDRMGK
HLLFILDDYVLISHLRMEGKYYFTSKDEPGEWQHIMVLFELDHQFQLRYHDTRKFGTMHL
YSKNDYLQQAPLNKLGYEPFDEKITVSYLKNSWQNKSQPIKTTLLEQNVIVGIGNIYANE
ILFASKIHPGEITKNLVDQDYQNIIENTKLVLQKAIDEGGTTIATYHPEPGMDGKFLQQL
KVHGRNKMECLNCHQLIDKIFINGRGTYFCNYCQKLK
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccagaagttgaaacggttcgtcgtattttaacaaaacatgttgttgga
aaaacaattactgattgtcaaattttttgaaataaaataataaaatatcctcttgattca
aaggaatttataaaagagattgttaaacaaaaaattaatcgaattgatcgaatgggaaaa
catttattatttatattggatgattatgttttaattagtcacttacgaatggaaggcaaa
tattattttacatcaaaagatgaacctggcgaatgacaacatattatggttttatttgaa
cttgatcatcaatttcaattgcgctatcatgatacaaggaaatttggaacaatgcattta
tatagtaaaaatgattatttacaacaagcaccattgaataagttaggatatgaaccattt
gatgaaaagattacagtttcatatttgaaaaattcttgacaaaataaatcgcagccaatt
aaaacaacattattggaacaaaatgttattgttggaattgggaatatttatgccaatgaa
attttatttgcctctaaaattcatcctggtgaaataacaaaaaatttagttgatcaagat
tatcaaaatattattgagaatacaaaactagttttgcaaaaagctattgatgaaggaggg
acaacaattgcaacttaccatcctgaaccagggatggatggtaaatttttacaacaatta
aaagtacatgggcgaaataaaatggaatgccttaattgccatcaattaattgataaaatt
tttattaatggacgtggaacttatttttgtaattattgccaaaaattaaaataa
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