Spiroplasma citri: SCITRI_00227
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Entry
SCITRI_00227 CDS
T04628
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
sck
Spiroplasma citri
Pathway
sck03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SCITRI_00227 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sck03400
]
SCITRI_00227 (uvrB)
DNA repair and recombination proteins [BR:
sck03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SCITRI_00227 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SCITRI_00227 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_7
AAA_30
P-loop_SecA
AAA_22
HerA_C
AAA_19
DUF87
Motif
Other DBs
NCBI-ProteinID:
APE74141
UniProt:
Q14PU4
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All DBs
Position
186383..188347
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AA seq
654 aa
AA seq
DB search
MFKLTSNYLPAGDQPRAIEKLTTNLFANKKHQVLLGATGTGKTFTMANVIENYQKPTLVM
AHNKTLAMQLYVELKEMFPENRVEYFVSNFDFYQPEAYLPGKDLYINKDARQNMELDMMR
LSAFNALTTRKDVIVVASVAAIYGAQDPNEYKKSFLQINRNQKISKKDLANFLVSSGYVR
NDIELIPGTFSAKGDVIKIVPGWNVKTFIRIDLFGDEIDDLAYIDGITGDVTQRLSTLTI
FPAQDYITSPERLVEAIKRIEAELKVRLVELEVAGKIVELQRLKQRTEYDLDLLRESGIC
SGIENYSRHLDLREEGEAPYTLIDFFGEDFLTIIDESHMSLPQIRAMYNTDRSRKETLVN
YGFRLKSALDNRPLNFDEFNQKLKNVIYVSATPGDYELGLVNNQVVEQIIRPTGLLDPTV
EVKSTVGQIDDIIEQVKIRRKKNERVFITTLTIRMSEDLTSYLQEQNVKVAYLHSELKTL
ERSQILLDLRKGVYDCIVGVNLIREGIDIPEVSLICILDADKQGFLRNERSLIQTIGRAA
RNAAGHVILYADTVSESMEKAMQETARRRQIQEAYNLKYHITPTTIIKNIRDYTNIKRQD
DKLHKIKNKKSKEYKTAKEGLLQDLRKEMYEASKKLDFERAAELRDIIIEIEAE
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaattaacatctaattatttaccagctggtgatcaaccgcgggcaattgaaaaa
ttaactaccaatttattcgcaaacaaaaagcatcaagttttgttaggagcaaccggaact
ggaaaaacatttacaatggcaaatgttattgaaaattatcagaagccaacattggtgatg
gctcataataaaacattagcaatgcaactatatgttgagttaaaagaaatgtttccagaa
aatcgtgttgagtattttgtttcaaactttgatttttatcaaccagaagcttatttacca
ggaaaagatttatatattaataaagatgctcgccaaaatatggaattagacatgatgcgg
ttaagtgcttttaatgctttaacaactcgaaaagatgttattgtcgtagcttctgttgct
gccatttatggggcacaagatccaaatgaatataaaaaatcttttttacaaattaatcgt
aatcaaaaaattagtaaaaaagatttagccaattttttagtatcatcaggatatgttcgt
aatgatattgaattaattccaggtacttttagtgctaaaggtgatgtgattaaaattgtt
ccaggctgaaatgttaaaacatttattcgaattgatttgtttggtgatgaaattgatgat
ttagcttatattgatggaatcactggtgatgttacacagcggttatcaacattaacaatt
tttccagcgcaagattatattacttctccagaacgattagttgaagcaattaaacgcatt
gaagcagagttaaaggttcgcttagttgaattagaagtggctggaaaaattgttgagtta
caacgtttaaaacaacgtacggaatatgatttagatttactccgtgaaagtgggatatgt
tctggaattgaaaattattcacgacatttagatttacgagaagaaggtgaagctccttat
actttgattgatttttttggcgaagattttttaactattattgatgaatcacatatgtca
ttaccgcaaattcgagcaatgtataacacagatcgaagtcgaaaagaaacattagtaaat
tatggttttcgtttaaaaagtgcattagataatcgccccctaaattttgatgaatttaat
caaaaattaaaaaatgttatttatgtttcagcaacgccgggggattatgaattaggttta
gtgaataaccaagtggttgaacaaattattcgtccaacagggttattagatccaacagta
gaagtaaaatcaacagtaggacaaattgatgatattattgagcaagtaaaaatacgccgc
aaaaaaaatgaacgtgtttttattactactttaacaattcgtatgtcagaagatttaaca
agttatttacaagaacaaaatgttaaagttgcatatttgcatagtgaattaaaaacttta
gaacgtagtcaaatcttattggatttacgaaaaggagtatatgattgcattgttggtgtt
aacttaattcgtgaagggattgatattccagaagtatcattaatttgtattcttgatgct
gataagcaaggatttttacgaaatgaacgaagtttaattcaaacaattggacgtgctgca
aggaatgctgctggacatgttattttatatgctgatactgtttctgaatcaatggaaaaa
gcaatgcaagaaactgctcgtcgacgtcaaattcaagaggcatataatttgaaatatcat
attactccaacgacaattattaagaatattcgtgattatactaatattaaacggcaagat
gataaattacataaaattaaaaataaaaaatcaaaagaatataaaacagctaaagaagga
ttactacaagatttacgaaaagaaatgtatgaagcaagtaaaaaacttgattttgaacga
gctgcagaattacgcgatattattattgaaattgaagcagaataa
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