Spiroplasma citri: SCITRI_00406
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Entry
SCITRI_00406 CDS
T04628
Name
(GenBank) putative CMP binding factor
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
sck
Spiroplasma citri
Brite
KEGG Orthology (KO) [BR:
sck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sck03019
]
SCITRI_00406
Messenger RNA biogenesis [BR:
sck03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SCITRI_00406
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
APE74311
UniProt:
A0AAJ4JXS4
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All DBs
Position
347472..348413
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AA seq
313 aa
AA seq
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MNIKDLKKEVNNVELIVIADKVTQGTASNGSTYLLITLKDRTGTIEARLWDARPADIETW
IKGNCYKVNINIIEYRKVLQAKINIYDIIDNANINLDDFIEVAPLSANAMYDEIITTVKK
MKTTEYREIMTLILEKYGEQFKIWPAAIRNHHEIKSGLIWHSLTMLQMAKNVANVYHDRL
IDSELLYCGVILHDLGKVIEITSGATNDFSFEGKLLGHISIMANELNHLAQSNNLNSEKI
VLLEHMILASHGRLEYGSPVEPHLLEAEILSFLDNLDARIYRIDKELEKTLLNEQTQRLL
SVEGRWFLKHFEK
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaatattaaagatttaaaaaaagaagttaataatgtagaattaattgtgattgctgat
aaggtaacccaaggaacagcttccaatggaagcacttatttattaataaccctgaaagac
cgtactggaacaattgaagcaaggttatgagatgctcgtccagctgatattgagacttga
attaaaggtaattgttacaaagtaaatattaatattattgaatatcgtaaagttttacaa
gcaaaaattaatatttatgatattattgataatgccaatattaatttagatgattttatt
gaagttgcgccactttcagcaaatgcaatgtatgatgaaattattacaacagtgaaaaaa
atgaaaacaactgaatatcgtgaaattatgactttaattttagaaaaatatggtgagcaa
tttaaaatttgaccagctgccattcgtaatcatcacgaaattaaatcaggtttaatttga
catagtttaactatgctacaaatggcaaaaaatgttgccaatgtttatcatgatcgttta
attgattcggaattattatattgtggtgttattttacatgatttaggaaaagttattgaa
attacaagtggagcgacaaatgatttttcatttgaaggaaaattacttgggcatatttca
attatggcaaatgaattaaatcatcttgcccaaagtaataatttaaattcagaaaaaatt
gttttgttagaacatatgattttagctagtcatggccgtttggaatatggttcacctgtt
gaaccacatttattagaagcagaaattttatcatttttagataatttggatgcacgaatt
taccgcattgataaagagttagaaaaaacattgcttaatgaacaaacacaacggttatta
tctgttgaaggtcgttgatttttaaaacattttgaaaaataa
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